Pairwise Alignments

Query, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

Subject, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

 Score =  164 bits (414), Expect = 2e-45
 Identities = 85/216 (39%), Positives = 139/216 (64%), Gaps = 2/216 (0%)

Query: 14  DLLERYGPRFIDGLLVTAKLVAISFSLGAVLGLLLALARLSRSLVLQRMAAGYVYFFRGS 73
           ++  ++ P FIDG  +T +LV +S   G ++ + L +AR SR L ++ +  GY++FFRG+
Sbjct: 4   EIFIKWLPSFIDGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIFFFRGT 63

Query: 74  PLLAQLFLLYYGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEIFRGSLMAVA 133
           PLL QLFL+YYG+       Q   LW + RD ++C ++  TL+TAAY AEI RG++  V 
Sbjct: 64  PLLVQLFLVYYGMAQFDVVRQSA-LWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVP 122

Query: 134 PGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVT 193
            G+ EAARAL + RS     +ILP++  + +    NE+ILM+KASA+AS +T+ +L G+ 
Sbjct: 123 HGEIEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTGMA 182

Query: 194 KLAFSRSF-DFQIYLWAAVLYLVIVELVRRLLKHLE 228
           +   +R++   +++L A ++YL+I  ++ +  K LE
Sbjct: 183 RKIAARTYLHEEMFLTAGLIYLLIAFILMQGFKLLE 218