Pairwise Alignments

Query, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

Subject, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (337), Expect = 2e-36
 Identities = 82/210 (39%), Positives = 118/210 (56%), Gaps = 12/210 (5%)

Query: 24  IDGLLVTAKLVAISFSLGAVLGLLLALARLSRSLVLQRMAAGYVYFFRGSPLLAQLFLLY 83
           + GLLVT +L  IS      LGL  AL R SRSLV + +  GY+   R +PLL Q++LLY
Sbjct: 62  LHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLLY 121

Query: 84  YGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEIFRGSLMAVAPGQHEAARAL 143
           +  G + G            D +   +LA  L   AY AE+FRG L ++  GQ+EAAR+L
Sbjct: 122 FVFGPVIGL-----------DRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSL 170

Query: 144 NLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVTK-LAFSRSFD 202
            L R  TF+ VILPQ L   + PL NE++ +IK S+I S++ I+DL    + +    +  
Sbjct: 171 GLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMP 230

Query: 203 FQIYLWAAVLYLVIVELVRRLLKHLEARLG 232
           F+I+   A +YL++   +  L   LE +LG
Sbjct: 231 FEIWFSVAAIYLLLTLTLSALSAWLEHKLG 260