Pairwise Alignments

Query, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

Subject, 219 a.a., cystine transport system permease protein from Caulobacter crescentus NA1000

 Score =  135 bits (341), Expect = 5e-37
 Identities = 85/218 (38%), Positives = 120/218 (55%), Gaps = 11/218 (5%)

Query: 14  DLLERYGPRFIDGLLVTAKLVAISFSLGAVLGLLLALARLSRSLVLQRMAAGYVYFFRGS 73
           DLL +  P  + G   T  L  I  S+G VLG LLAL RLSRS +L+  A  YV  FRG+
Sbjct: 6   DLLRQSAPLLLKGAGYTIVLSVIGMSIGVVLGFLLALMRLSRSALLRWPAGVYVSAFRGT 65

Query: 74  PLLAQLFLLYYGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEIFRGSLMAVA 133
           PLL QLFL+YYGL          GL            + F+LN AAY  EI R ++ AV 
Sbjct: 66  PLLVQLFLIYYGLPQF-------GLEM---PPLVAAGIGFSLNVAAYSCEILRSAIAAVD 115

Query: 134 PGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVT 193
            GQ EAA  L + R  T  +VILPQ+   A+ PL N  I ++K +++A+ + + +L    
Sbjct: 116 KGQWEAASVLGMSRGQTLRRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQA 175

Query: 194 KLAFSRSFD-FQIYLWAAVLYLVIVELVRRLLKHLEAR 230
           +L  +R+++ F +YL AA +Y ++  ++      LE R
Sbjct: 176 QLITARTYEIFTLYLAAAAIYWILSTILAAAQTRLERR 213