Pairwise Alignments

Query, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

Subject, 226 a.a., amino-acid transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  120 bits (302), Expect = 2e-32
 Identities = 76/215 (35%), Positives = 119/215 (55%), Gaps = 12/215 (5%)

Query: 19  LLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTVFRGLPELLTLLII 78
           L AG + T+ L L    +GL LGLV A+          A A  +  V RG P L+ L +I
Sbjct: 16  LWAGLIFTIPLTLLSFTLGLALGLVTAVVRLFAPAPFAAVARFYVWVIRGTPLLVQLFVI 75

Query: 79  YYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLAAFKTLPKGQLEAC 138
           +YG        L +MG     L++ F AA+I F+L   A+SSEI  A   ++P+GQ EA 
Sbjct: 76  FYG--------LPSMG----ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPRGQWEAA 123

Query: 139 SALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQTNLAVSVT 198
            ++G+S      + +LPQ  R+A+P LSN ++SL+KDTSL + I++ +L +     V+ +
Sbjct: 124 YSIGMSWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQTAQRIVATS 183

Query: 199 KEPMFFYGVACLGYLLFAALSGRVFAYIERRSNRH 233
            EP+  Y  A L YL+ +++   +   +E+R  R+
Sbjct: 184 YEPLILYIEAALIYLVMSSVLSALQGKLEQRFARY 218