Pairwise Alignments

Query, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

Subject, 241 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  121 bits (304), Expect = 1e-32
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 1/227 (0%)

Query: 6   SLLSFASGGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTV 65
           SLLS ++ GWG  LL G L ++ +A+    +GL LG+  A        + R     ++TV
Sbjct: 10  SLLSLSAPGWGGVLLQGFLSSIEIAVGGYALGLALGIGGAFGKLYGGPVLRDLLECYTTV 69

Query: 66  FRGLPELLTLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLA 125
            R +PEL+ +L++YY       ++L A+G  G   I+  +A +    +V  A+S+E+   
Sbjct: 70  VRAVPELVLILLLYYAGTDLLNQLLGAIGV-GAVDISGLVAGIFVIGVVQGAYSTEVLRG 128

Query: 126 AFKTLPKGQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLV 185
           A K +P GQ+EA  A G+S      ++ LP +   A+PGL+N WL   KDT+L++ +   
Sbjct: 129 AIKAVPAGQIEAARAYGMSPLLVLRRITLPAMLPYAIPGLANLWLIATKDTALLAVVGFS 188

Query: 186 DLMRQTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNR 232
           +L   T  A   TK  + F+  A   YL    +S      +ER + R
Sbjct: 189 ELTLVTRQAAGATKAYLLFFCAAGALYLALTLVSNVFIGMLERHARR 235