Pairwise Alignments

Query, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

Subject, 232 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  122 bits (305), Expect = 8e-33
 Identities = 79/226 (34%), Positives = 119/226 (52%), Gaps = 4/226 (1%)

Query: 12  SGGWGQALLAGALVTVSLALAC-LPIGLPLGLVVALAARSRKRLPRAWATTFSTVFRGLP 70
           +G W   LLA   VTV+    C L + +  GL+ A A  S  RL  A    ++  FRG P
Sbjct: 5   NGWWDDYLLAS--VTVAKVFVCSLILMVIFGLLGASAKLSSNRLANAVGNAYTVFFRGTP 62

Query: 71  ELLTLLIIYYGCQIAAQKILAAMGYQGEFL-INTFLAAMIAFSLVFAAFSSEIWLAAFKT 129
           E+L +L++Y+G  ++   I         F+ I  F A  IA +LV  ++++E +  AF  
Sbjct: 63  EILVILLLYFGSAVSLTTIARVFDPSVAFVDIPPFWAGSIAIALVVGSYATETFRGAFNG 122

Query: 130 LPKGQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDLMR 189
           +  G +EA  ALG++    FF + +P++ RIALP   N+ LSL+KDT+L+S I L + + 
Sbjct: 123 VKSGSIEAARALGMNGLQTFFYIRIPEMWRIALPPFGNHMLSLIKDTALISIIGLNETLF 182

Query: 190 QTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNRHLQ 235
               A S T +P   Y V  L YL F+         +E  +NRH+Q
Sbjct: 183 VAKQAASTTGKPFTMYIVVGLIYLGFSTAITISVLLLEALANRHIQ 228