Pairwise Alignments

Query, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

Subject, 238 a.a., arginine transporter permease subunit ArtQ from Klebsiella michiganensis M5al

 Score =  145 bits (367), Expect = 5e-40
 Identities = 94/228 (41%), Positives = 133/228 (58%), Gaps = 16/228 (7%)

Query: 19  LLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAW-ATTFSTVFRGLPELLTLLI 77
           L + A +TV LA+  L IGL L ++ A+   S K  P AW AT   T+ RGLPE+L +L 
Sbjct: 7   LASAAGMTVGLAVCALIIGLVLAMLFAVL-ESVKLRPIAWLATGIVTLLRGLPEILVVLF 65

Query: 78  IYYGCQ-------------IAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWL 124
           IY+G               +   +I   M  +  F ++ FL   IA SL++AA++S+   
Sbjct: 66  IYFGSSQLLLTLSDGFTINLGFVQIPVQMQIEN-FDVSPFLCGAIALSLLYAAYASQTLR 124

Query: 125 AAFKTLPKGQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISL 184
            A K +P+GQ E+  ALGLSK   FF++++PQ+ R ALPGL N WL LLKDT+LVS IS+
Sbjct: 125 GALKAVPQGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISV 184

Query: 185 VDLMRQTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNR 232
            DLM QT    + T+EP  +Y +A   YL+   LS  +   I++R+ R
Sbjct: 185 NDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLLSQYILKRIDQRATR 232