Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  220 bits (560), Expect = 2e-62
 Identities = 115/245 (46%), Positives = 155/245 (63%), Gaps = 3/245 (1%)

Query: 7   LLGACALLLAG--AASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVECT 64
           LL A A L+ G  A +AE LR  TEGAYPPFN +DA  K+ GFD+DI+HALC +MKVEC 
Sbjct: 8   LLTAAASLIIGTQAFAAEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALCAKMKVECE 67

Query: 65  LVAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDSAQ 124
           +V  DW+GIIPAL A K+D + ASM  TEER+  + FTDHYY   L     K+ +  + +
Sbjct: 68  VVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKNVEFQTDE 127

Query: 125 TDFVGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVIADKFPLH 184
               G  +GAQ ++    + ED   +   D+KLY T + A  DLA+GR+DG++AD F   
Sbjct: 128 GYLKGKVIGAQRATIAGTWLEDNLDRV-VDIKLYDTQENAYLDLASGRVDGILADTFVQW 186

Query: 185 EWMNKNGGDCCKILGDVADTKADAAIAVRKDDEALRQRLNTALQQIVANGTYQKIASKYF 244
           EW+  + G   +  G+        AIAVRK ++ LR+RLN AL +I+A+GTY++I  KYF
Sbjct: 187 EWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRERLNKALAEIIADGTYKQINDKYF 246

Query: 245 AFDIY 249
            F IY
Sbjct: 247 PFSIY 251