Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  146 bits (368), Expect = 4e-40
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 14/241 (5%)

Query: 12  ALLLAG----AASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVECTLVA 67
           A LLAG    A +A+T+RFATE +YPPF  +DA+NK+ GFDVD+ +ALC+++   CT   
Sbjct: 7   AALLAGMSLSATAAQTIRFATEASYPPFESIDANNKIVGFDVDLANALCKEIDATCTFTN 66

Query: 68  QDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDSAQTDF 127
           Q ++ +IP+L  R++DA++A M  T ER K++ FT  YY     + V +  K  S     
Sbjct: 67  QAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFTTPYYENS-ALFVGQQGKFTSIDA-L 124

Query: 128 VGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVIADKFPLHEWM 187
            G  VG Q+ +T   +  D + +       Y +   A  DL  GR+D V  D   + EW+
Sbjct: 125 KGKKVGVQNGTTHQKFITDKHPE--ITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWL 182

Query: 188 NKNGGDCCKILGDVADTK----ADAAIAVRKDDEALRQRLNTALQQIVANGTYQKIASKY 243
             N       +GD    K        IA+R+ +  L+Q+ N AL+++ ++GTYQ I +K+
Sbjct: 183 KSN--PKLAAVGDKVTDKDYFGTGLGIALRQGNTELQQKFNAALEKVKSDGTYQSIYNKW 240

Query: 244 F 244
           F
Sbjct: 241 F 241