Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 258 a.a., family 3 extracellular solute-binding protein from Klebsiella michiganensis M5al

 Score =  171 bits (434), Expect = 1e-47
 Identities = 93/256 (36%), Positives = 151/256 (58%), Gaps = 6/256 (2%)

Query: 1   MNKSMAL-LGACALLLAGAASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQM 59
           M KS+ L +   A   A A   + +RF  +  + PF + D   KL GFD+D+ +A+C Q+
Sbjct: 1   MKKSLLLWVALMASTSALAVENKEIRFGVDPTFAPFEWKDPQGKLAGFDIDLGNAICAQL 60

Query: 60  KVECTLVAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSK 119
           + +C  V  +++GIIPAL ARK+DAI++ M  TE+R+++I F+D  Y  P+ +   K++ 
Sbjct: 61  QAKCVWVESNFDGIIPALKARKFDAILSGMYMTEKRKEQIGFSDKLYNGPVFLVARKNTL 120

Query: 120 IDSAQTDFVGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDG-VIA 178
             +      G T+G +  S Q  Y    +  AG ++  Y   D    DL +GR+DG V++
Sbjct: 121 AGNTVEQLKGKTIGVEQGSAQETYVNQHWRTAGINIVAYQGADRVVQDLESGRIDGAVLS 180

Query: 179 DKFPLHEWMNK-NGGDCCKILGDVADTK---ADAAIAVRKDDEALRQRLNTALQQIVANG 234
                + ++ +  G D   + G + D K   A AAI +RK+D+ALRQ +N A+ +I+A+G
Sbjct: 181 GMMADYSFLQQPQGKDFAFVGGHLKDDKLFGAGAAIGLRKEDDALRQEINGAIARILADG 240

Query: 235 TYQKIASKYFAFDIYN 250
           TY+K+A KYF+FD+Y+
Sbjct: 241 TYKKLAGKYFSFDVYS 256