Pairwise Alignments

Query, 395 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

Subject, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (271), Expect = 2e-28
 Identities = 98/359 (27%), Positives = 167/359 (46%), Gaps = 18/359 (5%)

Query: 16  LLILLCLLGVFP---LDVILPSFPALSDEFRVDTKQIAYSVSFFAVGVAMAQIVIGPLSD 72
           L I+L  LG      +D+ LP+ P ++ +F V+   +  +++ +  G A+ Q++ GPL+D
Sbjct: 18  LYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLAD 77

Query: 73  GIGRKRLLLAGLSVSIVGALGCVFSTHYETFMAFRLVQAL-GCGSLVLGQALVQDLYSGT 131
             GR+ ++L G+ +  + A+    +   E     R  Q   G  + V+ QA+V+D++   
Sbjct: 78  SFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDRE 137

Query: 132 QRNAMRILLTSASGLFISLSPLAGAFLQQSFGWEASFTVFVIIAAIVSLLSCVLLHDTPA 191
                   +T    L   ++P+ G  L   FGW + F V  + AA+V  +    + +T +
Sbjct: 138 DFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLS 197

Query: 192 SHDRAPSMSSYRVMLRD-TDYLAHSMLSSLAFACHFSFIVIAPLLLMGR-LELTAYQFSL 249
             +R P    +R  +R+  D   + +   L F+  FSF  +   L  G  + +  Y  S 
Sbjct: 198 PENRQP--LRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSP 255

Query: 250 VFIGY--GLAYIVGGMAAAYLNSR----VSPQTQIKAGLLLISTAGITLLMWEWVAGLSV 303
              GY  GL  IV  +A   +N R    +     ++  L L   AGI L +  WV    +
Sbjct: 256 DGFGYLFGL-NIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFV-SWVLDWGL 313

Query: 304 LGALLPMIVCTTGT-TLVRPAATTQALARYPRQAGAAASLNTTLLFAGAGLTSSVVAGL 361
            G  +P +V   GT + +   +    L++YPR AG A+SL  TL F    +  +VVA L
Sbjct: 314 WGT-VPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAAL 371