Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 434 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

 Score =  560 bits (1442), Expect = e-164
 Identities = 279/414 (67%), Positives = 334/414 (80%), Gaps = 5/414 (1%)

Query: 1   MQASNSRSLRRWLVGLLILLLVAALAWWLWPAATPAHKEAGGVRGGKGMGMIG-GRPGFG 59
           MQ+S SR  RRWL+ LL+LL++ AL WW WPA+T       G    K     G  RPGFG
Sbjct: 6   MQSSGSRKSRRWLISLLVLLVIVALCWWFWPASTSGK----GAESNKKPATSGMARPGFG 61

Query: 60  GSSDPVPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDL 119
           GS+  VPVRV P   GDFP+YYKALGTVTA NT+NVRSRVAGELVK++F+EGQ VKAGDL
Sbjct: 62  GSAVAVPVRVAPATEGDFPIYYKALGTVTAMNTINVRSRVAGELVKLYFQEGQMVKAGDL 121

Query: 120 LAEIDPRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQ 179
           LAEIDPR Y++ALQQAEGTLA NQA LKNAQ+D+ RY+GL+AEDSIAKQTLDTAE+ V Q
Sbjct: 122 LAEIDPRSYQVALQQAEGTLATNQALLKNAQLDVQRYRGLFAEDSIAKQTLDTAESLVNQ 181

Query: 180 FQGLVKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPI 239
           ++G +KTNQA V DA+LNLDF++IRAPI+GRVGL+QLD+GNLVAANDTTAL VITQT+PI
Sbjct: 182 YKGTIKTNQAAVADAKLNLDFSRIRAPIAGRVGLKQLDVGNLVAANDTTALAVITQTQPI 241

Query: 240 NVAFTLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKG 299
           +VAFTLPE +LS V+ RYR+G  LPVEAWDRGD+K+Q+TGVL S+DNQID  TGTLKFK 
Sbjct: 242 SVAFTLPEKDLSKVISRYRTGDKLPVEAWDRGDTKMQATGVLASLDNQIDVATGTLKFKA 301

Query: 300 RFENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKV 359
           RF+N D  LFPNQFVN+RL ADTLK+V + P AA+QFG DGTF YV++    V ++ LK 
Sbjct: 302 RFDNSDEVLFPNQFVNIRLRADTLKKVTLVPTAAVQFGTDGTFVYVLDGDKKVKLKLLKT 361

Query: 360 GASDGENSVILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQVPTSPGQHLQGQ 413
           G SD  ++VI +GL AG+R+VLEGTDRLR+G +VEVV DS +VP  P Q LQG+
Sbjct: 362 GPSDETSTVITEGLAAGERVVLEGTDRLRDGAEVEVVNDSKEVPAGPAQKLQGK 415