Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 426 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  160 bits (405), Expect = 7e-44
 Identities = 123/410 (30%), Positives = 189/410 (46%), Gaps = 27/410 (6%)

Query: 17  LILLLVAALAWWLWPA-ATPAHKEAGGVRGGKGMGMIGGRPGFGGSSDPVPVRVVPVRIG 75
           L L+  AAL+  LW   +    + AGG R    + +I   P     ++ +P R V  R  
Sbjct: 35  LRLMTTAALSAVLWSCDSQEGGQAAGGARPAPEVTVITAAPQTLRITERLPGRTVAYR-- 92

Query: 76  DFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQA 135
                           +  VR +V G ++K  F+EG  V  G  L +IDP  Y+ AL  A
Sbjct: 93  ----------------SAEVRPQVNGIILKRLFEEGTEVTEGQQLYQIDPATYKAALDSA 136

Query: 136 EGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDAR 195
           +  LA+  A +K+A+   ARY  L    ++++Q  D   A +A+    V   QA V+ A 
Sbjct: 137 KAQLAKADATVKSARAKAARYGELVKLKAVSRQDYDDVTATLAESVASVADAQATVDAAE 196

Query: 196 LNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLPETELSTVLE 255
           +NL +T++ APISGR+G   +  G LV AN  T L  ITQ +PINV  T    +L  +  
Sbjct: 197 INLAYTRVTAPISGRIGRSAVTEGALVTANQATTLATITQLDPINVDLTQSSDKLLKLRA 256

Query: 256 RYRSGA-----SLPVEAW-DRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALF 309
           +  +G       +PV    D   +    TG L   +  +D TTGT++ +  F N +  L 
Sbjct: 257 QMANGTVQAPERVPVTLQIDNSGTPYGLTGTLQFSEVVVDETTGTVRLRATFPNPNRILL 316

Query: 310 PNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFA-YVVNEQSTVNVRKLKVGASDGENSV 368
           P  FV   +   + + V + P  A+     G  A +V+ +      R +    + G N V
Sbjct: 317 PGLFVRATVDFGSRENVFLIPQRAVVRDASGKAALWVIGDGDKAERRPVTAETTQGTNWV 376

Query: 369 ILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQVPTSPGQHLQGQEAKGA 418
           + +GLK G+R+V+ G   +  G +V+ V  +       GQ   GQ A  A
Sbjct: 377 VTEGLKGGERIVIAGLQSMAPGAQVKAVA-APPAGQEAGQPAGGQPAPAA 425