Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 398 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  159 bits (401), Expect = 2e-43
 Identities = 99/318 (31%), Positives = 164/318 (51%), Gaps = 5/318 (1%)

Query: 85  GTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQNQA 144
           G + A +   +R  V G L ++ F++GQ V  GD+L  IDP PY  A+ +AE +L   + 
Sbjct: 68  GRLRAVDLAEIRPEVGGRLTEVRFRDGQTVAVGDVLFVIDPAPYEAAMAKAEASLTSART 127

Query: 145 QLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFTQIR 204
               A+ +L R   L    +IA++  D         Q  V   +A+V  AR++LD T+++
Sbjct: 128 NAAFARTELNRAVSLVKTQTIAQRLYDERANANRLAQAAVLVAEAEVKRARIDLDHTRVK 187

Query: 205 APISGRVGLRQLDLGNLVAANDTTALVV-ITQTEPINVAFTLPE-TELSTVLERYRSGAS 262
           API+GRV   ++ +GN+V       L+  I   + +   F + E T +S +  R  S   
Sbjct: 188 APIAGRVSRAEITVGNVVQPGAGAPLLTSIVSNDGLYADFEVDEQTYMSGIRARGPSRDQ 247

Query: 263 ---LPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALFPNQFVNVRLL 319
              +PV+   +GD      G + S DN+ID+ TGT++ +    N+D AL P  FV+V++ 
Sbjct: 248 ENRIPVQITAQGDEAHPYGGTIHSFDNRIDSATGTIRARALLANEDGALMPGMFVSVKVA 307

Query: 320 ADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASDGENSVILDGLKAGDRL 379
           +      +M    AI       F YVV E + V  R++ +GA      ++L GL+AG+R+
Sbjct: 308 SGGGAGALMVQERAIGNDQSKKFVYVVGEDAKVAYREVDLGARVEGERIVLSGLRAGERV 367

Query: 380 VLEGTDRLREGTKVEVVE 397
           +++G  ++R    VE+ E
Sbjct: 368 IVDGLQQVRPTMTVEIKE 385