Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 395 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  178 bits (452), Expect = 2e-49
 Identities = 107/343 (31%), Positives = 177/343 (51%), Gaps = 6/343 (1%)

Query: 53  GGRPGFGGSSDPVPVRVVPVRIGDFPL--YYKALGTVTATNTVNVRSRVAGELVKIHFKE 110
           GG P       P    V    +   P+  +    G + A   V +R +V+G L  +HFK+
Sbjct: 32  GGAPAMAA---PAAASVEVAEVASRPVTDWQSYSGRLEAVERVELRPQVSGVLTAVHFKD 88

Query: 111 GQRVKAGDLLAEIDPRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTL 170
           G  VK GDLL  IDPRP+   + +A+  LA  +A+      DLAR + L AE++++++  
Sbjct: 89  GSLVKKGDLLFSIDPRPFAAEVARAQAQLAGAEARAAYTGADLARGERLLAENAVSRRDF 148

Query: 171 DTAEAQVAQFQGLVKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTAL 230
           +  +    +    +K  QA +  A LNL++T+I APISGR+   ++ +GNLVA  +   L
Sbjct: 149 EEKQNAAREAAATLKAAQAALKVAELNLEYTRITAPISGRMSRAEVTVGNLVAPGNAAPL 208

Query: 231 VVITQTEPINVAFTLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDT 290
             +   + I  AF + E      +     G  LP+      +S     G L S+DN++D+
Sbjct: 209 TTLVSADSIYAAFDVDEQSYLKYVSG-SQGKGLPIRMGLADESGHGREGRLSSVDNRLDS 267

Query: 291 TTGTLKFKGRFENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQS 350
           T+GT++ +  F+N D  L P  +  VRL ++  ++ V+    A+    D  F  VV+ ++
Sbjct: 268 TSGTIRLRAVFDNPDGRLVPGLYARVRLGSEAPREAVLVDEKAVGTDQDKRFVLVVDGKN 327

Query: 351 TVNVRKLKVGASDGENSVILDGLKAGDRLVLEGTDRLREGTKV 393
               R++++GA      V+  GLKAG+R+V+ G  R+R G +V
Sbjct: 328 RTAYREVRLGAVQEGLRVVESGLKAGERIVVNGLQRVRPGDEV 370