Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 374 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Klebsiella michiganensis M5al

 Score =  154 bits (389), Expect = 4e-42
 Identities = 103/334 (30%), Positives = 167/334 (50%), Gaps = 3/334 (0%)

Query: 67  VRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPR 126
           V VV ++    P+     G  TA+ +  VR +V G + K  F EG  VKAG  L +IDP 
Sbjct: 33  VGVVTLQGQPVPVVSSLTGRTTASLSAEVRPQVGGIVQKRLFTEGDMVKAGQALYQIDPS 92

Query: 127 PYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKT 186
            YR    +A  +L Q QA +        RY  L  ++ +++Q  D A A   Q +  V++
Sbjct: 93  SYRATFNEAAASLKQAQALVTADCQKAQRYAVLVKDNGVSRQDADDAIATCNQDKASVES 152

Query: 187 NQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLP 246
            +A +  AR+NL++T + API+GR+G+  +  G LV+A+  TAL  I   + + V  T  
Sbjct: 153 KKAALESARINLNWTTVTAPIAGRIGISSVTPGALVSADQDTALATIRGLDTMYVDLTRS 212

Query: 247 ETELSTVLERYRSGAS--LPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENK 304
             +L  + ++  +  S  L V       S     G L   +  +D +TG++  +  F N 
Sbjct: 213 SVDLLRLRKQSLASNSDTLNVTLTLEDGSTYSEKGRLALTEVAVDESTGSVTLRAVFPNP 272

Query: 305 DLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDG-TFAYVVNEQSTVNVRKLKVGASD 363
              L P  FV  R+    +   ++AP   I     G   A VV+  + V  R ++ G + 
Sbjct: 273 QHVLLPGMFVRARIDEGIMNDAILAPQQGITRDAKGDATALVVDANNKVEQRSVETGETY 332

Query: 364 GENSVILDGLKAGDRLVLEGTDRLREGTKVEVVE 397
           G+  +I++GLK+GDRL++EGT ++  G +V+  E
Sbjct: 333 GDKWLIVNGLKSGDRLIVEGTGKVAPGQQVKAAE 366