Pairwise Alignments

Query, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

Subject, 359 a.a., RND transporter MFP subunit from Klebsiella michiganensis M5al

 Score =  177 bits (450), Expect = 4e-49
 Identities = 114/334 (34%), Positives = 180/334 (53%), Gaps = 4/334 (1%)

Query: 65  VPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEID 124
           VPVRVV V         +  G V A ++V++R+R  G++V+ HF++GQ V  GDLL  +D
Sbjct: 27  VPVRVVTVEQAPHAGERQISGRVEAIHSVDIRARTEGKIVQRHFQDGQYVNQGDLLFTLD 86

Query: 125 PRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLV 184
               + AL  A+  L   QA L+ AQ  L+RY+ L    +I +  LDTA+ Q       V
Sbjct: 87  DAQPKAALALAQAELKSAQASLRQAQQLLSRYQQLINNHAIGRNDLDTAQMQRDVAAAAV 146

Query: 185 KTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFT 244
           +  +A++   ++ L +T+I +P+SGRVG     +G+LV    +  LV + Q +PI VAF+
Sbjct: 147 EQARARIAAQQITLGYTRITSPVSGRVGHSPFHVGSLVNP-ASGVLVDVVQLDPIRVAFS 205

Query: 245 LPETELSTVLERYRSGASLPVEAW--DRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFE 302
           L ET       ++   A+L  EAW         +  GVL S+DN+ID+ T ++  +  F 
Sbjct: 206 LDETVFFAKAGQHTDIAALK-EAWLAQVDVDGRREDGVLTSVDNRIDSRTASVALRAEFA 264

Query: 303 NKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGAS 362
           N    L P   V +      L++  M PAAA+Q    G +++V+   +TV +R+L     
Sbjct: 265 NPQHRLLPGGNVTIFFRPRQLQESPMIPAAAMQQDAQGFYSWVLTADNTVTMRRLTPAGQ 324

Query: 363 DGENSVILDGLKAGDRLVLEGTDRLREGTKVEVV 396
            G+   + +GL  G+R+V EG  RLR+G  V+++
Sbjct: 325 QGQQFAVAEGLLPGERVVTEGAQRLRDGAAVQLL 358