Pairwise Alignments

Query, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1082 a.a., Acriflavin resistance protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 1000 bits (2586), Expect = 0.0
 Identities = 533/1063 (50%), Positives = 737/1063 (69%), Gaps = 45/1063 (4%)

Query: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60
            +  S +FI RP+AT+L M  I+L G++ Y+ LPVSALP++D P++ V T YPGA+   M 
Sbjct: 1    VGFSTIFIRRPIATSLLMAGILLLGILGYRQLPVSALPEIDAPSLVVSTQYPGANATTMA 60

Query: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120
            S VT PLERQ GQ+ GL+ M S SS G S + L+F++D ++D+A Q VQAAI  A+  LP
Sbjct: 61   SLVTTPLERQLGQISGLQMMTSDSSAGLSTIILQFSMDRDIDIAAQDVQAAIRQAT--LP 118

Query: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180
            S LP  PVYN+VNPAD  +LTL ++S T+PL ++N   D  +AQ+L+Q+ GVG+VSIAG 
Sbjct: 119  SSLPYQPVYNRVNPADAAILTLKLTSDTLPLREVNRYADAILAQRLSQVPGVGLVSIAGN 178

Query: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240
             R AVRI+VN   L+  GL ++ +R+ +  +NV+ PKG+ +G T+   +  NDQL    +
Sbjct: 179  VRPAVRIQVNPAQLSNMGLTMESLRSALTQTNVSAPKGSLNGKTQSYSIGTNDQLTDAAQ 238

Query: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300
            Y   I++YNNGAP+RL DVA++VDG EN++LAAWA+   AVLL I+RQPGAN+++ V++I
Sbjct: 239  YRETIISYNNGAPVRLADVAKVVDGVENDQLAAWADGKPAVLLEIRRQPGANIVQTVEQI 298

Query: 301  KGLLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATL 360
            + +LP +   LPA + + V +DRT+TIRA+V +V+  L++ I LVV V FVFLRR  AT+
Sbjct: 299  RSILPQLQGVLPADVHLDVFSDRTETIRASVHEVKFTLVLTIFLVVAVIFVFLRRLWATI 358

Query: 361  IPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETP 420
            IPS+AVPLSL GTFGVM  AG S++NL+LMAL +ATGFVVDDAIVM+ENI R+IE+G++ 
Sbjct: 359  IPSVAVPLSLAGTFGVMAFAGMSLDNLSLMALVVATGFVVDDAIVMIENIVRYIEQGKSG 418

Query: 421  MQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480
             +AA  GARQIGFT++SLT SL+AV +PLL M  V GRLF EFA  L++A++IS++VSLT
Sbjct: 419  PEAAEIGARQIGFTVLSLTVSLVAVFLPLLLMPGVTGRLFHEFAWVLSIAVVISMLVSLT 478

Query: 481  LTPMMCARLLKRE--PKEEEQGRFYRASGAWIDW--LIQHYGSALQWVLKHQPLTLLVAV 536
            LTPMMCA LLK +  P+ E+      A G    W   +  Y  +L WVL HQPLTL VA+
Sbjct: 479  LTPMMCAYLLKPDALPEGEDAHERAAAEGKTNLWTRTVGVYERSLDWVLDHQPLTLAVAI 538

Query: 537  ASLVLTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQS 596
             ++ LTV LY+ +PKG  P QDTG+I G+ +  Q+ +F  M +R QA++  + +DPAV  
Sbjct: 539  GAVALTVVLYVAIPKGLLPEQDTGLITGVVQVDQNVAFPQMEQRTQAVAAALRKDPAVTG 598

Query: 597  LSSYIGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDL 656
            ++++IG    N TLN G+L I LK  G+RD     V++RLQ  V  + G+ LF++PVQD+
Sbjct: 599  VAAFIGAGSMNPTLNQGQLSIVLKTRGDRD-DLETVVARLQKAVSGIPGVALFLKPVQDV 657

Query: 657  SIEDRVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDR 716
            +++ RV+ T+YQ+S++  D+  LA W+ ++ +A+++ PELADV ++L ++G  + L IDR
Sbjct: 658  TLDTRVAATEYQYSMADVDSTELASWATRMTEAMRKLPELADVDNNLANQGRALELSIDR 717

Query: 717  DMASRLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQ------------------- 757
            D AS LG+ +  I + LYDAFGQRQISTI+T+ +QYRVVL+                   
Sbjct: 718  DKASMLGVPMQTIDDTLYDAFGQRQISTIFTELNQYRVVLEVAPEFRSSTALMNQLAVAS 777

Query: 758  ------------------SSDAATIGPQALESIHVKATDGGQVRLSALARIEQRQAQLAI 799
                              SS+++T      ++  +    G  + L+ALA  +     L +
Sbjct: 778  NGSGALTGTNATSFGQVTSSNSSTATGVGNQNTGIVVGAGSIIPLAALAEAKVTNTPLVV 837

Query: 800  SHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLGVQTRFQGAAEAFQASLSSTL 859
            SH  Q PAVT+SFNLA G SL +AV  IEQ + D+ +P  V   F G A  F  S +  +
Sbjct: 838  SHQQQLPAVTISFNLAPGHSLSQAVAAIEQARADLKIPTQVHAEFVGKAAEFTGSQTDIV 897

Query: 860  LLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLALLISGNDLGMIAIIGIILL 919
             L+LA++V +YIVLGVLYESYIHP+TI+STLP A VGALLAL++ G  L +  I+GI+LL
Sbjct: 898  WLLLASIVVIYIVLGVLYESYIHPLTIISTLPPAGVGALLALMVCGLSLSVDGIVGIVLL 957

Query: 920  IGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRPILMTTLAALFGAVPLMLATG 979
            IGIVKKNAIMMIDFA+EA R  G++  +AI +A LLRFRPI+MTT AA+ GA+PL L TG
Sbjct: 958  IGIVKKNAIMMIDFAIEARRT-GVNAHEAIRRACLLRFRPIMMTTAAAMLGALPLALGTG 1016

Query: 980  SGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLARRLR 1022
             G+ELR+PLG+ +VGGLL+SQ++TL+TTPVIYLY +R   R+R
Sbjct: 1017 IGSELRRPLGIAIVGGLLLSQLVTLYTTPVIYLYMERAGERVR 1059