Pairwise Alignments

Query, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1044 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score =  531 bits (1368), Expect = e-154
 Identities = 329/1026 (32%), Positives = 568/1026 (55%), Gaps = 26/1026 (2%)

Query: 6    LFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMTSAVTA 65
            LFI RP+   +    IV+AGL A+  + +  LPQVD P + V T + GASP+ +   VT+
Sbjct: 23   LFIRRPIFALVVNTLIVVAGLAAWNGVEIRELPQVDQPVVSVTTEFDGASPETIDREVTS 82

Query: 66   PLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLPSDLPA 125
             +E    ++ G++ ++S+SS G S +TL F+   ++  A   V+ A+   +  LP D   
Sbjct: 83   VIEGAVSRVQGIKGISSSSSFGRSRVTLEFSDTTDIGQAANDVRDALGRITGQLPDDADE 142

Query: 126  PPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGGQRQAV 185
            P +  K +    P++ LA++S TM +  +  LV+  ++ +LA + GV  V++ G Q +  
Sbjct: 143  PRIV-KADSDSQPIMRLALTSDTMSMDDMTLLVENEISDRLAAVEGVADVTVYGDQEKIF 201

Query: 186  RIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEEYANLI 245
            RI +N   LA  G+ + ++R  +  ++ + P G+    ++   + A   L++PE++ NL+
Sbjct: 202  RIDLNQAKLAGRGVTVANLREALSDASYDVPAGSLTSASQDISVRATADLQTPEQFENLM 261

Query: 246  LAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRIKGLLP 305
            L  N    +RL+DVA +  G +    A  +N    + L I RQ  +N +++ + ++ ++ 
Sbjct: 262  LGNN----VRLRDVATVTLGPDTGTSALRSNGREGIGLGIIRQAQSNTVDISEGVRSVVD 317

Query: 306  SIT-DNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATLIPSI 364
            +I+ D LP G ++ + +D    I  A+ +V+  L +A+ +V +V ++FL  + ATLIP+I
Sbjct: 318  AISSDILPTGTELKITSDDAVFINGAIHEVEIALFVAVFIVTLVIYLFLLDWRATLIPTI 377

Query: 365  AVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETPMQAA 424
             +P++LIGT   +YLAGFS+N LTL+A+ +ATG VVDDAIV+LENI R   EG  P  AA
Sbjct: 378  TMPIALIGTVAAIYLAGFSINILTLLAIVLATGLVVDDAIVVLENIVRRRAEGLGPRAAA 437

Query: 425  LKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLTLTPM 484
            + G  ++ F +++ T +L AV +PL F+    G LFREF   LA +IL+S  VSLTL PM
Sbjct: 438  VHGTLEVFFAVLATTATLAAVFVPLSFLPGQTGGLFREFGFVLAFSILLSSFVSLTLCPM 497

Query: 485  MCARLLKREPKEEE--QGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLVLT 542
            + +R+L +EP E +    RF R + A+       Y   L+  L    +   VA       
Sbjct: 498  LASRMLTKEPHEHDGVMQRFGRRASAF-------YRVTLRACLNAPLIVFAVAAFFTAAG 550

Query: 543  VFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQS--LSSY 600
               ++ +     P +D   +     APQ  S      + + + + +   P ++S  +S+ 
Sbjct: 551  ALGFLTLKSELTPNEDRSQVMLRINAPQGVSLEYTQAQLRRIEEGL--QPLLKSGEISNV 608

Query: 601  IGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIED 660
              + G   + NSG +++ L P  ER+ +  ++++ +     ++  +R F   +Q  S+  
Sbjct: 609  FSISGQGGSANSGFMVLTLAPWEERERTQGQIVADINRATSKIPSVRAF--TIQANSLGI 666

Query: 661  RVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDMAS 720
            R + +  Q +L   D   L   + KLV+A++      +V  + +    Q+ + IDR+ AS
Sbjct: 667  RGAGSGLQVALVGNDYTKLGDAAAKLVRAMEDTGRFENVRLNYEANQAQLSVTIDRERAS 726

Query: 721  RLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATDGG 780
             LG+ +  ++ AL        +  I+ +   Y V L SS      P  L++I VKA DG 
Sbjct: 727  DLGVDIGGLSWALQAMLDGSSVVDIFVEGEAYPVKLLSSTEPLNDPTDLQNIFVKAGDGR 786

Query: 781  QVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLGV 840
             V +S++A +E++     +S   Q  AV+LS  L    +LGEA+ ++E++ + + +P G 
Sbjct: 787  IVPMSSIATVEEKAVAPQLSRESQLRAVSLSAGLKSDLALGEALSMVEEMAEPL-LPPGS 845

Query: 841  QTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLA 900
            +      A     + +   +    A+V +++VL   +ES++  + I+ST+P     A+ A
Sbjct: 846  RVMPLAEAATLDENANGLFVTFGFALVIIFLVLAAQFESFVSGLIIMSTVPLGLACAVFA 905

Query: 901  LLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRPI 960
            ++++GN L + + IG+++L+GI+ KN I++++FA +  R++G   R AI  AA +R RP+
Sbjct: 906  MIVTGNTLNIYSQIGLVMLVGIMAKNGILIVEFANQL-RDRGQDVRSAIENAANIRLRPV 964

Query: 961  LMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLARR 1020
            +MT +A + GAVPL+LA+G+GAE R  LG V+VGGL ++ V+TL+ TPV YL    +AR 
Sbjct: 965  MMTMIATVVGAVPLVLASGAGAEARIALGWVLVGGLGLAVVVTLYLTPVAYLV---IARF 1021

Query: 1021 LRPATD 1026
             +P  D
Sbjct: 1022 TKPHAD 1027