Pairwise Alignments

Query, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1018 a.a., efflux RND transporter permease subunit from Parabacteroides merdae CL09T00C40

 Score =  509 bits (1311), Expect = e-148
 Identities = 308/1015 (30%), Positives = 550/1015 (54%), Gaps = 20/1015 (1%)

Query: 2    NLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMTS 61
            N+S + I RPV +T+  + ++L G+I YK L V   P VD P I V   YPGA+ +V+ +
Sbjct: 3    NISEISIKRPVLSTVMTIILLLFGMIGYKFLGVREFPSVDNPIISVNVTYPGANAEVIMN 62

Query: 62   AVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLPS 121
             +T PLE+    +PG+  ++S SS G+  +T+ F L ++++ A   V+  ++ A   LP 
Sbjct: 63   QITEPLEQNINGIPGIRSLSSVSSQGSCRITVEFELSVDLETAANDVRDKVSRAQRYLPR 122

Query: 122  DLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGGQ 181
            D   PP  +K +   TP++ + I S    L +L+++ +  V ++L  I  V  V I G +
Sbjct: 123  DCD-PPTVSKADADATPIMQIGIRSSKRSLMELSEIAELTVKERLQTIPNVSGVDIWGQK 181

Query: 182  RQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEEY 241
            R ++R+ ++   +A  G+   DV+  + A NV  P G+ +G T    +     + +  E+
Sbjct: 182  RYSMRLWLDPIKMAGYGITPLDVKNAVDAENVELPSGSIEGNTIDLSIRTLGLMHTATEF 241

Query: 242  ANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRIK 301
             +LI+  +    +R +DV       E+ R     N    V+  I  QPGAN IE+ D   
Sbjct: 242  NDLIIKRDGDNIIRFQDVGRAEVSPEDLRSVMRKNGEPMVIDVIIPQPGANQIEIADEAY 301

Query: 302  GLLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATLI 361
              +  +  +LP  + V ++ D T+ IRA++ +V+  + +A +LVV++ F+FLR +  TL+
Sbjct: 302  KRIEQLKKDLPEDVTVEMVYDNTRFIRASIAEVEETIYVAFLLVVLIIFLFLRDWRVTLV 361

Query: 362  PSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETPM 421
            P + +P+SL+G F VMY++GFS+N LT++A+ ++ G VVDDAIVM ENI   IE+G  P 
Sbjct: 362  PVVVIPVSLVGAFFVMYVSGFSINVLTMLAVVLSVGLVVDDAIVMAENIYVRIEQGMEPK 421

Query: 422  QAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLTL 481
            +A + GA++I F ++S T +L++V +P++FM  + GRLF+EF+I +A ++ IS  V+LT 
Sbjct: 422  EAGIDGAKEIFFAVVSTTVTLVSVFLPIVFMEGMTGRLFKEFSIVIAGSVTISSFVALTF 481

Query: 482  TPMMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLVL 541
            TPM+  +LL+   K E +G  Y  +  + + +   Y  +L   L H+  ++ + V     
Sbjct: 482  TPMLATKLLR---KRENKGWLYTKTEPFFEGMNNIYAKSLNAFLNHKWWSIPIVVILFGS 538

Query: 542  TVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSE-RQQALSKVILQDPAVQSLSSY 600
              + +  +     P++D   I     A +  +F  + +   Q  +      P  Q+L+  
Sbjct: 539  IGYFWRTIRSELSPLEDRSSISINIRAQEGATFEFIRDFTDQVAAMADTLAPERQALTV- 597

Query: 601  IGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIED 660
                   A  ++G + + L    +R+ S  E+   L   V      R F+Q  Q  +   
Sbjct: 598  ------RANNSNGYITVLLPDIKDRERSQMEIADVLSKNVRGKTEARAFVQ--QQSTFGG 649

Query: 661  RVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRP--ELADVASDLQDKGLQVYLVIDRDM 718
            R +    Q+ L +   + L ++    +Q + + P  ++ADV  +L+    +  + I+RD 
Sbjct: 650  RRAGMPVQYVLQATSLEKLQEYLPAFMQKVSESPVFQMADV--NLKFTKPEARIEINRDK 707

Query: 719  ASRLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATD 778
            AS LG+S   I   L  A   +++   Y    QY+++ + +      P  L+SI+V++  
Sbjct: 708  ASSLGVSTRTIAQTLQYALSGQRMGYFYMNGKQYQILGEINRQQRNTPLDLKSIYVRSDA 767

Query: 779  GGQVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPL 838
            G  ++L  L  +++  A   +    +F + T+S  L  G ++G+ +  ++++  +  +  
Sbjct: 768  GEMIQLDNLVTLKEDVAPPQLYRYNRFVSATVSSGLNKGYTIGDGLDEMDRIASET-LDN 826

Query: 839  GVQTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGAL 898
              +T   G ++ F+ S SS +  ++ A+  +Y+VL   +ES+  P+ ++ T+P A  GAL
Sbjct: 827  SFRTALSGESKEFRESSSSLMFAMILALFMIYLVLAAQFESFKDPLVVMFTVPLAIAGAL 886

Query: 899  LALLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFR 958
            + +  S   + + + IGII+LIG+V KN I++++FA    +  G+S  +AI  A+  R R
Sbjct: 887  IFMSYSDITMNIFSQIGIIMLIGLVAKNGILIVEFA-NQRQEAGLSMAEAIRSASTQRLR 945

Query: 959  PILMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLY 1013
            PILMT+++ + G VPL+ A+G GA+ R  +G+ +VGG++VS  LTLF  P +Y +
Sbjct: 946  PILMTSISTILGLVPLVYASGEGAQGRIAMGIAVVGGMIVSTFLTLFIVPAMYSF 1000