Pairwise Alignments

Query, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1025 a.a., multidrug transporter subunit MdtC from Klebsiella michiganensis M5al

 Score =  972 bits (2513), Expect = 0.0
 Identities = 515/1029 (50%), Positives = 709/1029 (68%), Gaps = 8/1029 (0%)

Query: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60
            M    LFI RPVAT L  LAI L G++ ++LLPV+ LPQVD+P I +    PGASP+ M 
Sbjct: 1    MKFFALFIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMISASLPGASPETMA 60

Query: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120
            S+V  PLER  G++ G+ +M S+SS G++ + L FN D +++ A + VQAAINAA +LLP
Sbjct: 61   SSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLP 120

Query: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180
            S +P+ P Y K NP+D P++ L ++S T    +L D   T++AQ LAQI GVG V + G 
Sbjct: 121  SGMPSRPTYRKANPSDAPIMILTLTSDTWSQGELYDFASTQLAQTLAQIDGVGDVDVGGS 180

Query: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240
               AVR+ +N  AL   G++LD VRT I  +NV +P+G  +  T    +  ND+L++  E
Sbjct: 181  SLPAVRVDLNPQALFNQGVSLDAVRTAISNANVRRPQGALEDATHRWQVATNDELKTAAE 240

Query: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300
            Y  LI+ YNNGA +RL DVA + D  ++ R A   N   A+LL I++ P AN+IE VD I
Sbjct: 241  YQPLIVHYNNGAAVRLGDVANVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIETVDSI 300

Query: 301  KGLLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATL 360
            +  LP +   +PA +D+ +  DR+ TIRA++++V+  L+I++ LV++V F+FLR   ATL
Sbjct: 301  RARLPELQRTIPASVDLQIAQDRSPTIRASLEEVEQTLVISVALVILVVFLFLRSGRATL 360

Query: 361  IPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETP 420
            IP++AVP+SLIGTF  MYL GFS+NNL+LMALTIATGFVVDDAIV+LENISRH+E G  P
Sbjct: 361  IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHLEAGMKP 420

Query: 421  MQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480
            +QAAL+G+R++GFT++S++ SL+AV +PLL M  + GRL REFA+TL+VAI ISL VSLT
Sbjct: 421  LQAALQGSREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLAVSLT 480

Query: 481  LTPMMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLV 540
            LTPMMC  LLK     +   +  R  G  +  +   YG +L+WVLKH  LT LV + ++ 
Sbjct: 481  LTPMMCGWLLKSGKPHQPTRK--RGFGRLLVAIQGGYGKSLKWVLKHSRLTGLVLLGTIA 538

Query: 541  LTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLSSY 600
            L+V+LY+ +PK FFP QDTGV+ G  +A QS SF AM  + +   K+I +DPAV +++ +
Sbjct: 539  LSVWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLEDFMKIIREDPAVDNVTGF 598

Query: 601  IGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIED 660
             G     + +NSG + I LKP  ER  +A ++I RL+ ++ +  G  LF+  VQD+ +  
Sbjct: 599  TG----GSRVNSGMMFITLKPRDERHETAQQIIDRLRKKLAKEPGANLFLMAVQDIRVGG 654

Query: 661  RVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDMAS 720
            R +   YQ++L S D   L +W  K+ + L   PELADV SD Q+ G ++ L+ DRD  S
Sbjct: 655  RQANASYQYTLLSDDLAALREWEPKIRKTLAALPELADVNSDSQNNGAEMDLIYDRDTMS 714

Query: 721  RLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATDGG 780
            RLGISV    N L +AFGQRQISTIY   +QY+VV+Q     T    AL+ + V  ++  
Sbjct: 715  RLGISVQDANNLLNNAFGQRQISTIYQPLNQYKVVMQVDPVYTQDVSALDKMFVINSEDK 774

Query: 781  QVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLGV 840
             + L+  A+ +   A L+++H G   A T+SFNL  G SL EA   I +    IG+P  V
Sbjct: 775  PIPLAYFAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSEASDAINRAMTQIGVPSSV 834

Query: 841  QTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLA 900
            +  F G A+ FQ +++S ++LILAA+ T+YIVLG+LYESY+HP+TILST+PSA VGALLA
Sbjct: 835  RGSFAGTAQVFQETMNSQVILILAAIATVYIVLGILYESYVHPLTILSTIPSAGVGALLA 894

Query: 901  LLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRPI 960
            L +      +IA+IGI+LLIGIVKKNAIMM+DFALEA+RN  + P +AI+QA LLRFRPI
Sbjct: 895  LELFDAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGNLPPEEAIFQACLLRFRPI 954

Query: 961  LMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLARR 1020
            +MTTLAALFGA+PL+L+ G+G+ELRQPLG+ +VGGL++SQ+LTL+TTPV+YL+FDRL  R
Sbjct: 955  MMTTLAALFGALPLVLSGGNGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRL--R 1012

Query: 1021 LRPATDVKQ 1029
            LR +  V Q
Sbjct: 1013 LRFSRKVHQ 1021