Pairwise Alignments

Query, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1040 a.a., multidrug transporter subunit MdtB from Klebsiella michiganensis M5al

 Score = 1276 bits (3301), Expect = 0.0
 Identities = 656/1029 (63%), Positives = 827/1029 (80%), Gaps = 1/1029 (0%)

Query: 4    SRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMTSAV 63
            SRLFI+RPVATTL M+AI+LAG+I Y+ LPVSALP+VDYPTI+V+TLYPGASP VMTS+V
Sbjct: 13   SRLFIMRPVATTLLMVAIMLAGIIGYRFLPVSALPEVDYPTIQVVTLYPGASPDVMTSSV 72

Query: 64   TAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLPSDL 123
            TAPLERQFGQM GL+QM+S SSGGASV+TL+F L + +DVAEQ+VQAAINAA+NLLPSDL
Sbjct: 73   TAPLERQFGQMSGLKQMSSQSSGGASVVTLQFQLTLPLDVAEQEVQAAINAATNLLPSDL 132

Query: 124  PAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGGQRQ 183
            P PPVY+KVNPAD P++TLA++S  +P+ ++ D+V+TRVAQK++Q+SGVG+V++AGGQR 
Sbjct: 133  PNPPVYSKVNPADPPIMTLAVTSSAVPMTQVEDMVETRVAQKISQVSGVGLVTLAGGQRP 192

Query: 184  AVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEEYAN 243
            AVR+K+N  A+AA GL  + VRT I ++NVN  KG+ DGP+R   L ANDQ++S E+Y  
Sbjct: 193  AVRVKLNAQAIAALGLTSETVRTAITSANVNSAKGSLDGPSRAVTLSANDQMQSAEDYRR 252

Query: 244  LILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRIKGL 303
            LI+A+ NGAP+RL DVA +  GAEN  L AWAN   A+++N+QRQPGAN+I   D I+ +
Sbjct: 253  LIIAWQNGAPIRLGDVATVEQGAENSWLGAWANNQRAIVMNVQRQPGANIISTADSIRQM 312

Query: 304  LPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATLIPS 363
            LP +T++LP  + V VL+DRT  IRA+V D Q EL++AI LVVM+ +VFLR   AT+IP 
Sbjct: 313  LPQLTESLPKSVKVQVLSDRTTNIRASVSDTQFELMLAIALVVMIIYVFLRNVPATIIPG 372

Query: 364  IAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETPMQA 423
            IAVPLSL+GTF VM    FS+NNLTLMALTIATGFVVDDAIV++ENISR+IE+GE P+ A
Sbjct: 373  IAVPLSLVGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAA 432

Query: 424  ALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLTLTP 483
            ALKGA +IGFT+ISLTFSLIAVLIPLLFM D+VGRLFREFAITLAVAILIS VVSLTLTP
Sbjct: 433  ALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTP 492

Query: 484  MMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLVLTV 543
            MMCAR+L  E    +Q RF RAS  + + +I  YG  L  VL H  LTL VA+++L L++
Sbjct: 493  MMCARMLSHE-SLRKQNRFSRASERFFERVIAVYGRWLSRVLNHPWLTLSVALSTLALSI 551

Query: 544  FLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLSSYIGV 603
             L++ +PKGFFP+QD G+IQG  +APQS SFA M+ERQQ +S  IL+DPAV+SL+S++GV
Sbjct: 552  MLWVFIPKGFFPIQDNGIIQGTLQAPQSASFANMAERQQQVSAAILKDPAVESLTSFVGV 611

Query: 604  DGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIEDRVS 663
            DG N  LNS RL INLKP  ERD     VI RLQ  V  + G+ L++QP QDL+I+  VS
Sbjct: 612  DGTNPALNSARLQINLKPLDERDDRVQTVIGRLQNAVSGIPGVELYLQPTQDLTIDTTVS 671

Query: 664  RTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDMASRLG 723
            RTQYQF+L +   D L+ W  +L+  LQ  P+L+DV+SD QDKGL  Y+ +DRD ASRLG
Sbjct: 672  RTQYQFTLQANSLDALSNWVPQLLARLQALPQLSDVSSDWQDKGLAAYINVDRDSASRLG 731

Query: 724  ISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATDGGQVR 783
            IS++ + NALY+AFGQR ISTIYTQA+QYRVVL+    AT G  AL++I + ++DGG V 
Sbjct: 732  ISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHDTQATPGLAALDNIRLTSSDGGIVP 791

Query: 784  LSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLGVQTR 843
            L+A+A++EQR A L+I+H+ QFP  T+SFN+    SLG+AV+ I   ++ +  P  ++T+
Sbjct: 792  LTAIAKVEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVEAILSAEQALDFPSDIRTQ 851

Query: 844  FQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLALLI 903
            FQG++ AFQ++L ST+ L++AAVV MYIVLGVLYES+IHPITILSTLP+A VGALLAL +
Sbjct: 852  FQGSSLAFQSALGSTVWLVVAAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALWL 911

Query: 904  SGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRPILMT 963
            +G++L +IAIIGIILLIGIVKKNAIMMIDFAL AER QGM PR+AIYQA LLRFRPILMT
Sbjct: 912  AGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMPPREAIYQACLLRFRPILMT 971

Query: 964  TLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLARRLRP 1023
            TLAALFGA+PLML+TG GAELR+PLG+ MVGGL++SQVLTLFTTPVIYL FDRL+  ++ 
Sbjct: 972  TLAALFGALPLMLSTGVGAELRRPLGIGMVGGLMLSQVLTLFTTPVIYLLFDRLSLYMKS 1031

Query: 1024 ATDVKQAQA 1032
                ++ +A
Sbjct: 1032 RFPRREEEA 1040