Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1038 a.a., Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA from Pseudomonas fluorescens FW300-N2E2

 Score =  809 bits (2089), Expect = 0.0
 Identities = 441/1030 (42%), Positives = 660/1030 (64%), Gaps = 14/1030 (1%)

Query: 8    IRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMASTVATPL 67
            I  P+AT+LL+ A++LLG ++F  LPVAPLP+ +FP I V+A L GASPE MAS+VATPL
Sbjct: 12   IDHPIATVLLTFALVLLGMIAFPRLPVAPLPEAEFPTIQVNAQLPGASPETMASSVATPL 71

Query: 68   ERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLPSGMRSMP 127
            E +  +I G+T +TSSS  GST +++ F L + ID AA+EVQAAIN     LP+ M ++P
Sbjct: 72   EVQFSAIPGITQMTSSSALGSTNLILQFSLDKSIDTAAQEVQAAINTAAGKLPNDMPNLP 131

Query: 128  TYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGSSLPAVRI 187
            T++K+NP+ +P+++LS++S ++   +L D  +T+LS+ ++Q+ GVG++ I G   PA+R+
Sbjct: 132  TWRKVNPADSPVLILSISSSLMPGTELSDYVETLLSRQISQIDGVGQIYITGQQRPAIRV 191

Query: 188  AVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKDYEPVVIR 247
                  L    L+L ++R A+  A+     G +        +  NDQL   ++Y  +++ 
Sbjct: 192  QASADRLAAIGLTLADIRLALQQASLNLAKGALYGDSSISTLSTNDQLFQPEEYGELIVS 251

Query: 248  QQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQIKAQLPAL 307
             ++G  + L D+A V +G EN Y   + + +  V LV+ RQ GANI+ETVD+I+A LP L
Sbjct: 252  YKDGAPVHLKDIAKVVNGSENAYVQAWSDSEPGVNLVIFRQPGANIVETVDRIQAALPTL 311

Query: 308  QSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASLIPSLAVP 367
            Q++LPA++Q+ V +DR+  I+A+L E E TLLIAV+LV+ V+ LFL  L A+LI S  + 
Sbjct: 312  QAMLPAAIQVKVLIDRTQTIRASLHEVEITLLIAVLLVVAVMALFLRQLSATLIVSAVLG 371

Query: 368  VSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPPMKAAFLG 427
            VSL  +FA+MYV GFSLNNL+L+A++++ G VVDDAIVV+ENI RH+E G    +AA  G
Sbjct: 372  VSLTASFALMYVMGFSLNNLTLVAIVISVGFVVDDAIVVVENIHRHLEAGDGMREAAIKG 431

Query: 428  AKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLTLTPMLCA 487
            A E+GFT++S++ SLVA F+ +LFMGG+V  LF+EF++T  + I++S+VVSLTL P L A
Sbjct: 432  AGEIGFTVVSISFSLVAAFIPLLFMGGVVGRLFKEFALTATSTILISVVVSLTLAPTLAA 491

Query: 488  RWLK-PQQAEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGINIALYVV 546
             +++ P     +++        +R++  Y+  L  AL H++L +     T+ + +  YV 
Sbjct: 492  LFMRAPVHHAHSKM-----GFGERLLGWYERGLRRALAHQKLMIGVFGLTLALAVVGYVF 546

Query: 547  VPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSVA---GFIGGNS 603
            +PK   P QDTG ++G       +SF  M  K +     + ADPAVQ+ +   G  G N 
Sbjct: 547  IPKGFFPVQDTGLVLGTSEAAADVSFPDMVAKHKALADIVAADPAVQTFSHSVGVSGNNQ 606

Query: 604  GTNNAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGGGGRDQTSS 663
               N    + LKP SER + A   I+R+R +L K+PG  L+L A QD+ L  G    + +
Sbjct: 607  TIANGRFWIALKPRSERDVSASGFIDRIRPQLLKIPGVVLYLRAGQDINLSSG---PSRA 663

Query: 664  QYLYTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDRDQAKRLGID 723
            QY Y L+S D  +L  W  K+   LR  P    I      G     + +DR  A R G+ 
Sbjct: 664  QYQYVLKSNDGPSLNAWTQKLTDRLRGNPAFRDISNDLQLGGSITHINIDRSAAARFGLT 723

Query: 724  MDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQVIT-ADGARVPL 782
               V   L +A+ QRQI+      NQY V+LE++ +      +L    + +   G  VPL
Sbjct: 724  ATDVDQALYDAFGQRQINEFQTETNQYNVILELDTQQRGKAESLAYFYLRSPLSGEMVPL 783

Query: 783  STIAHYE-NSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLPEEVIAK 841
            S +A ++  S     ++H+G F + +++F++A G +   A+  L++A  ++G+P  +   
Sbjct: 784  SALARFDAPSNGPLSIAHDGMFPAANLSFNLAPGVALGDAVRLLDQAKNEIGMPAAITGN 843

Query: 842  LGGTADAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVGALLALYV 901
              G A AF  +   QP++IL AL+ VY++LG+LYES++HPLTI+STLPSAG+GAL+ L++
Sbjct: 844  FQGAAQAFQSSLASQPWLILAALVAVYIILGVLYESFVHPLTIISTLPSAGLGALIMLWL 903

Query: 902  TGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLRLRPILMT 961
             G +FS+++L+GL LLIG+VKKN ILMID AL  +R++G +P+E+I +ACL R RPI+MT
Sbjct: 904  LGQDFSIMALIGLVLLIGIVKKNGILMIDFALDAQRNKGLAPQEAIFQACLTRFRPIMMT 963

Query: 962  TLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDRLRHRFNR 1021
            TLAA+LGALPL+L    GAE+RQPLG+ ++GGL+ SQ LTL+TTPV+YL+L+RL HR   
Sbjct: 964  TLAALLGALPLMLGYGPGAELRQPLGIAVVGGLLVSQALTLFTTPVIYLWLERLFHRPAH 1023

Query: 1022 WRGVRTDAAL 1031
              G    AAL
Sbjct: 1024 QPGSAPTAAL 1033