Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1026 a.a., Cation/multidrug efflux pump from Pseudomonas stutzeri RCH2

 Score =  931 bits (2407), Expect = 0.0
 Identities = 488/1027 (47%), Positives = 697/1027 (67%), Gaps = 13/1027 (1%)

Query: 1    MNLSGPFIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMA 60
            MN+S  FI RPVAT L  +AI+L G +++ LLPVA LPQ+D+P I V     GASPEVM 
Sbjct: 1    MNISRLFILRPVATTLSMVAILLAGLIAYKLLPVAALPQVDYPTIRVMTLYPGASPEVMT 60

Query: 61   STVATPLERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLP 120
            S V  PLER+ G + G+  ++S+S+ G++ + + F L   +D A +EVQAAIN   NLLP
Sbjct: 61   SAVTAPLERQFGQMPGLAQMSSTSSGGASVITLRFSLDVALDVAEQEVQAAINGANNLLP 120

Query: 121  SGMRSMPTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGS 180
            + + + P Y K+NP+  P++ L++TS+ L   +L+DL DT ++Q LAQ++GVG V I G 
Sbjct: 121  NDLPAPPVYNKVNPADTPVLTLAVTSESLPLPKLHDLVDTRMAQKLAQINGVGMVSIAGG 180

Query: 181  SLPAVRIAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKD 240
              PAVRI   P+ L  Y LSL +VR+ ++++N  +P G  +   R   + ANDQL++ ++
Sbjct: 181  QRPAVRIRTNPEALAAYGLSLADVRSLITSSNVNQPKGNFDGPTRVSMLDANDQLKTPEE 240

Query: 241  YEPVVIRQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQI 300
            Y  +++  Q+G  LRL DVA + DG EN   + + N+  AVLL V RQ GAN+I+ V++I
Sbjct: 241  YAELILTYQDGAALRLKDVADIVDGAENERLAAWANESQAVLLNVQRQPGANVIDVVERI 300

Query: 301  KAQLPALQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASL 360
            +A LP + + +PA + + V  DR+  I+A + + +H L++A  LV++V ++FL  L A++
Sbjct: 301  QALLPEVTASMPAGLDVVVLTDRTQTIRAAVTDVQHELMLATFLVVMVTFVFLKKLSATV 360

Query: 361  IPSLAVPVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPP 420
            IPS+AVP+SLVGTFAVMYVCGFSLNNL+LMAL +ATG VVDDAIV+LENI+RH+E G+ P
Sbjct: 361  IPSIAVPLSLVGTFAVMYVCGFSLNNLTLMALTIATGFVVDDAIVMLENIARHLEEGETP 420

Query: 421  MKAAFLGAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLT 480
            + AA  GA+++GFTL+S+  SL+AV + +LFM  +V  LF+EF+ITLA AI++SLVVSLT
Sbjct: 421  LNAALKGARQIGFTLISLTFSLIAVLIPLLFMQDVVGRLFREFAITLAVAILISLVVSLT 480

Query: 481  LTPMLCARWLKPQQAEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGIN 540
            LTPM+CA+ LKP    + +   W     +R++  Y   L W LRH+ LTLL  +AT+G+ 
Sbjct: 481  LTPMMCAKLLKPHSVAEAK-PDWV----ERLIGGYSRWLTWVLRHQTLTLLVAVATLGLT 535

Query: 541  IALYVVVPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSVAGFI- 599
            + LY+ VPK   P QDTG + G       +SF  M  + +   R +LADP+VQS++ +I 
Sbjct: 536  VVLYLAVPKGFFPVQDTGVIQGISEAPQSISFRAMSERQQALARVILADPSVQSLSSYIG 595

Query: 600  --GGNSGTNNAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGGGG 657
              G N   N+  +L+ LKP  ER + A ++I+RLR EL KVPG  L+L   QDL +    
Sbjct: 596  VDGDNVTLNSGRLLINLKPHGERDLTASQIIDRLRPELAKVPGIELYLQPVQDLSI---- 651

Query: 658  RDQTS-SQYLYTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDRDQ 716
             D+ S +Q+ ++L++ D   L+EW P++V ALR  PELT + +   +   Q+ L +DRD 
Sbjct: 652  EDRVSRTQFQFSLETPDSELLQEWTPRLVEALRERPELTDVASDLQSNGLQIYLDIDRDA 711

Query: 717  AKRLGIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQVITAD 776
            A RLGI +  +T  L +A+ QRQISTI+   +QY+VVLE        P  LEQ+ V +  
Sbjct: 712  AARLGIQVADITDALYDAFGQRQISTIFTQASQYRVVLEAEAGNRLGPQALEQLFVQSEG 771

Query: 777  GARVPLSTIAHYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLPE 836
            G  V LS++A +E   A   ++H GQF +  ++F++A G S  +A+  +E    ++GLP 
Sbjct: 772  GTPVRLSSLATFEQRNAPLLINHIGQFPAVTLSFNLASGVSLGKAVEVIEAVEQQIGLPA 831

Query: 837  EVIAKLGGTADAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVGAL 896
             +  +  G A+AF  +      +I  A++ +Y+VLG+LYESYIHP+TILSTLPSA VGAL
Sbjct: 832  GIQTRFQGAAEAFRASLSSTLLLIFAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGAL 891

Query: 897  LALYVTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLRLR 956
            LAL +TG +  LI+++G+ LLIG+VKKNAI+MID AL+ ERHQG SP+++I RA LLR R
Sbjct: 892  LALLLTGNDLGLIAIIGIILLIGIVKKNAIMMIDFALEAERHQGMSPQDAIYRAALLRFR 951

Query: 957  PILMTTLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDRLR 1016
            PILMTTLAA+ GA+PL+L+   GAE+RQPLGL ++GGL+ SQ+LTL+TTPV+YL+ DRL 
Sbjct: 952  PILMTTLAALFGAIPLMLASGSGAELRQPLGLVLVGGLLLSQLLTLFTTPVIYLFFDRLG 1011

Query: 1017 HRFNRWR 1023
             RF R R
Sbjct: 1012 QRFGRRR 1018