Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1082 a.a., Acriflavin resistance protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  827 bits (2136), Expect = 0.0
 Identities = 459/1066 (43%), Positives = 666/1066 (62%), Gaps = 53/1066 (4%)

Query: 7    FIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMASTVATP 66
            FIRRP+AT LL   I+LLG + +  LPV+ LP++D P +VVS    GA+   MAS V TP
Sbjct: 7    FIRRPIATSLLMAGILLLGILGYRQLPVSALPEIDAPSLVVSTQYPGANATTMASLVTTP 66

Query: 67   LERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLPSGMRSM 126
            LER+LG I+G+  +TS S+ G + +++ F + RDID AA++VQAAI      LPS +   
Sbjct: 67   LERQLGQISGLQMMTSDSSAGLSTIILQFSMDRDIDIAAQDVQAAIRQAT--LPSSLPYQ 124

Query: 127  PTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGSSLPAVR 186
            P Y ++NP+ A I+ L LTSD L   ++   AD IL+Q L+QV GVG V I G+  PAVR
Sbjct: 125  PVYNRVNPADAAILTLKLTSDTLPLREVNRYADAILAQRLSQVPGVGLVSIAGNVRPAVR 184

Query: 187  IAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKDYEPVVI 246
            I V P  L+   L+++ +R+A++  N   P G +    +++ +  NDQL  A  Y   +I
Sbjct: 185  IQVNPAQLSNMGLTMESLRSALTQTNVSAPKGSLNGKTQSYSIGTNDQLTDAAQYRETII 244

Query: 247  RQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQIKAQLPA 306
               NG  +RL+DVA V DGVEN   + + + + AVLL + RQ GANI++TV+QI++ LP 
Sbjct: 245  SYNNGAPVRLADVAKVVDGVENDQLAAWADGKPAVLLEIRRQPGANIVQTVEQIRSILPQ 304

Query: 307  LQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASLIPSLAV 366
            LQ +LPA V L+V  DR+  I+A++ E + TL++ + LV+ V+++FL  L A++IPS+AV
Sbjct: 305  LQGVLPADVHLDVFSDRTETIRASVHEVKFTLVLTIFLVVAVIFVFLRRLWATIIPSVAV 364

Query: 367  PVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPPMKAAFL 426
            P+SL GTF VM   G SL+NLSLMAL++ATG VVDDAIV++ENI R+IE G+   +AA +
Sbjct: 365  PLSLAGTFGVMAFAGMSLDNLSLMALVVATGFVVDDAIVMIENIVRYIEQGKSGPEAAEI 424

Query: 427  GAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLTLTPMLC 486
            GA+++GFT+LS+ VSLVAVF+ +L M G+   LF EF+  L+ A+++S++VSLTLTPM+C
Sbjct: 425  GARQIGFTVLSLTVSLVAVFLPLLLMPGVTGRLFHEFAWVLSIAVVISMLVSLTLTPMMC 484

Query: 487  ARWLKP------QQAEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGIN 540
            A  LKP      + A +         L  R V  Y+ SL W L H+ LTL   +  + + 
Sbjct: 485  AYLLKPDALPEGEDAHERAAAEGKTNLWTRTVGVYERSLDWVLDHQPLTLAVAIGAVALT 544

Query: 541  IALYVVVPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSVAGFIG 600
            + LYV +PK L+P+QDTG + G ++ D  ++F  M+ + +    AL  DPAV  VA FIG
Sbjct: 545  VVLYVAIPKGLLPEQDTGLITGVVQVDQNVAFPQMEQRTQAVAAALRKDPAVTGVAAFIG 604

Query: 601  G---NSGTNNAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGGGG 657
                N   N   + + LK   +R  D + V+ RL+K +  +PG  LFL   QD+ L    
Sbjct: 605  AGSMNPTLNQGQLSIVLKTRGDRD-DLETVVARLQKAVSGIPGVALFLKPVQDVTL---D 660

Query: 658  RDQTSSQYLYTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDRDQA 717
                +++Y Y++   D   L  W  ++  A+R LPEL  +D       + + L +DRD+A
Sbjct: 661  TRVAATEYQYSMADVDSTELASWATRMTEAMRKLPELADVDNNLANQGRALELSIDRDKA 720

Query: 718  KRLGIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQV----- 772
              LG+ M  +   L +A+ QRQISTI+  LNQY+VVLE+ P++    + + Q+ V     
Sbjct: 721  SMLGVPMQTIDDTLYDAFGQRQISTIFTELNQYRVVLEVAPEFRSSTALMNQLAVASNGS 780

Query: 773  --------------------------------ITADGARVPLSTIAHYENSLANDRVSHE 800
                                            +   G+ +PL+ +A  + +     VSH+
Sbjct: 781  GALTGTNATSFGQVTSSNSSTATGVGNQNTGIVVGAGSIIPLAALAEAKVTNTPLVVSHQ 840

Query: 801  GQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLPEEVIAKLGGTADAFAQTQQGQPFMI 860
             Q  +  I+F++A G+S  QA+AA+E+A A L +P +V A+  G A  F  +Q    +++
Sbjct: 841  QQLPAVTISFNLAPGHSLSQAVAAIEQARADLKIPTQVHAEFVGKAAEFTGSQTDIVWLL 900

Query: 861  LGALLLVYLVLGILYESYIHPLTILSTLPSAGVGALLALYVTGGEFSLISLLGLFLLIGV 920
            L +++++Y+VLG+LYESYIHPLTI+STLP AGVGALLAL V G   S+  ++G+ LLIG+
Sbjct: 901  LASIVVIYIVLGVLYESYIHPLTIISTLPPAGVGALLALMVCGLSLSVDGIVGIVLLIGI 960

Query: 921  VKKNAILMIDLALQLERHQGFSPEESIRRACLLRLRPILMTTLAAILGALPLLLSQAEGA 980
            VKKNAI+MID A++  R  G +  E+IRRACLLR RPI+MTT AA+LGALPL L    G+
Sbjct: 961  VKKNAIMMIDFAIE-ARRTGVNAHEAIRRACLLRFRPIMMTTAAAMLGALPLALGTGIGS 1019

Query: 981  EMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDRLRHRFNRWRGVR 1026
            E+R+PLG+ I+GGL+ SQ++TLYTTPV+YLY++R   R   WR  R
Sbjct: 1020 ELRRPLGIAIVGGLLLSQLVTLYTTPVIYLYMERAGERVRDWRARR 1065