Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1037 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  529 bits (1362), Expect = e-154
 Identities = 348/1013 (34%), Positives = 552/1013 (54%), Gaps = 13/1013 (1%)

Query: 1    MNLSGPFIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMA 60
            M++S  FIRRPV   +LSL ++++G  +   L V  LP +D  V+ V+   +GA+PE++ 
Sbjct: 1    MDVSSLFIRRPVFATVLSLLLVVMGIAAMTRLAVRELPDIDSAVVSVTTPYTGAAPEIVD 60

Query: 61   STVATPLERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLP 120
            + +   +E  +  ++G+ T+TS S +G  R VI FE G  +D A  +V+ A+   R  LP
Sbjct: 61   TDITEVIENAVAGVSGIRTITSQSRRGQGRTVIEFESGVSMDEAVNDVRDAVAKVRGDLP 120

Query: 121  SGMRSMPTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGS 180
              +   P   K +    P+M LSLTS  +   +L D AD  +   LA + GV +V + G 
Sbjct: 121  DDIEE-PRIAKSDTDSDPVMRLSLTSPRMTPIELTDFADRYIVDRLATIDGVAQVDLYGE 179

Query: 181  SLPAVRIAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKD 240
               A+R+ ++ + +    +++ +V  A+  AN   P G +E A R   VRA   L S + 
Sbjct: 180  RRQAIRLWLDRRAMAARQVTVQDVEAALRRANVELPAGEIESASRLLTVRAATLLTSPEA 239

Query: 241  YEPVVIRQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQI 300
            +   VI+  +G  LR+ DVA V  GVEN   +     + A+ + V RQ+ AN +   ++I
Sbjct: 240  FGSTVIKVVDGYPLRVRDVARVELGVENDDTTVRVEGRDALTMGVLRQSQANTVAISNRI 299

Query: 301  KAQLPALQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASL 360
            +A++  L+  LP  + L V+ D +  I  ++ E   TL ++ ++VI+V + FLGS+RA+L
Sbjct: 300  RAEIDRLRPSLPEGMSLEVSSDDALFINRSIHEVILTLGLSGLIVIIVNFAFLGSIRATL 359

Query: 361  IPSLAVPVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPP 420
            +P++ +PV+++GTF  + + GFS+N L+L+ALIL+ GLVVDDAIVVLENI R IE G+P 
Sbjct: 360  VPTVTIPVAVIGTFIGILLLGFSINLLTLLALILSIGLVVDDAIVVLENIQRRIEAGEPK 419

Query: 421  MKAAFLGAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLT 480
            + AA  G ++V F +++ +++L+AVFV I FM G V  LF EF   LA A+ +S++V+LT
Sbjct: 420  LVAAARGTRQVTFAVVATSLTLIAVFVPISFMEGTVGRLFTEFGFVLACAVAISMLVALT 479

Query: 481  LTPMLCARWLKPQQAEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGIN 540
            L P L A  L   +AE  RL    +     +   Y  +L   L    + L   L   G +
Sbjct: 480  LCPPLAAGVLAEGKAE-GRLAHALNYAFGTLSRGYQRALSAVLGLPMVVLTVALLCGGAS 538

Query: 541  IALYVVVPKTLMPQQDTGQLMGFIRGDDGLS--FTVMQPK-MEIYRRALLADPAVQSVAG 597
              LY  +PK L+P +D G ++  + G  G +  +T  Q + +E   + +L       V  
Sbjct: 539  FWLYQGLPKELVPVEDRGVVVVSLNGPQGANTRYTDTQIRAVEAAVQPVLDRGEAVGVLA 598

Query: 598  FIGGNSGTNNAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGGGG 657
             +G  +  +  +V++RL     R   A  + E LRK+L K+ G     +    L L G  
Sbjct: 599  QVGQWNRPHRGYVVIRLDDWENRGRTASALAESLRKDLGKLAGATATPVVPAGLGLRG-- 656

Query: 658  RDQTSSQYLYTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDRDQA 717
              +T  Q +  +   D A +  W   ++     LP L   +        Q+++ +DRD+A
Sbjct: 657  -SRTPLQVV--IGGPDYAEVEVWANALLKRAEELPGLINPELDFEQNQPQLSVGIDRDRA 713

Query: 718  KRLGIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQV-ITAD 776
              LG+ ++ +   L    + R+++   D   +YQVV++  P+    PS L    V     
Sbjct: 714  DDLGVGVEAIGQTLQTMLASREVTRFVDRGREYQVVVQARPEDRRTPSDLSNTFVRAEKG 773

Query: 777  GARVPLSTIAHYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLPE 836
            GA VPL  +   + +     ++   +  S  +   +A GY   QA+  +  A+A   +P 
Sbjct: 774  GALVPLDALVILKETAGAPDLNRYARLPSITLQSALAPGYDMGQAIDDV-MALASQTVPP 832

Query: 837  EVIAKLGGTADAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVGAL 896
            E    L G +  F +T  G  F  L AL++VYLVL   +ES++HPL I+ ++P A  GAL
Sbjct: 833  EARLSLAGQSKEFLETSGGVLFTFLMALVIVYLVLAAQFESFLHPLIIMLSVPLAVSGAL 892

Query: 897  LALYVTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLRLR 956
            L+L+ TG   ++ S +G+ LLIG+  KN IL+++ A QL R +G S  E+I  A  LRLR
Sbjct: 893  LSLWATGNSINVYSQIGIVLLIGLTAKNGILIVEFANQL-RDEGRSVREAILEAASLRLR 951

Query: 957  PILMTTLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVY 1009
            PILMT +  ILGA+PL  S   GAE R+ +G+ +IGGL  + +LTL+ TPV+Y
Sbjct: 952  PILMTVICTILGAVPLAWSSGAGAESREAIGIVVIGGLGLASLLTLFVTPVLY 1004