Pairwise Alignments

Query, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

Subject, 1025 a.a., multidrug transporter subunit MdtC from Klebsiella michiganensis M5al

 Score = 1098 bits (2840), Expect = 0.0
 Identities = 571/1015 (56%), Positives = 747/1015 (73%), Gaps = 4/1015 (0%)

Query: 7    FIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMASTVATP 66
            FI RPVAT+LLSLAI L G + F LLPVAPLPQ+DFPVI++SA+L GASPE MAS+VATP
Sbjct: 7    FIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMISASLPGASPETMASSVATP 66

Query: 67   LERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLPSGMRSM 126
            LER LG IAGV  +TSSS+ GSTR+++ F   RDI+GAAR+VQAAINA ++LLPSGM S 
Sbjct: 67   LERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLPSGMPSR 126

Query: 127  PTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGSSLPAVR 186
            PTY+K NPS APIM+L+LTSD   +G+LYD A T L+Q+LAQ+ GVG+V +GGSSLPAVR
Sbjct: 127  PTYRKANPSDAPIMILTLTSDTWSQGELYDFASTQLAQTLAQIDGVGDVDVGGSSLPAVR 186

Query: 187  IAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKDYEPVVI 246
            + + PQ L    +SLD VRTA+SNAN RRP G +EDA   WQV  ND+L++A +Y+P+++
Sbjct: 187  VDLNPQALFNQGVSLDAVRTAISNANVRRPQGALEDATHRWQVATNDELKTAAEYQPLIV 246

Query: 247  RQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQIKAQLPA 306
               NG  +RL DVA VTD V++  N+G  N + A+LL++ +   ANIIETVD I+A+LP 
Sbjct: 247  HYNNGAAVRLGDVANVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIETVDSIRARLPE 306

Query: 307  LQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASLIPSLAV 366
            LQ  +PASV L +A DRSP I+A+L+E E TL+I+V LVILVV+LFL S RA+LIP++AV
Sbjct: 307  LQRTIPASVDLQIAQDRSPTIRASLEEVEQTLVISVALVILVVFLFLRSGRATLIPAVAV 366

Query: 367  PVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPPMKAAFL 426
            PVSL+GTFA MY+CGFSLNNLSLMAL +ATG VVDDAIVVLENISRH+E G  P++AA  
Sbjct: 367  PVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHLEAGMKPLQAALQ 426

Query: 427  GAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLTLTPMLC 486
            G++EVGFT+LSM++SLVAVF+ +L MGG+   L +EF++TL+ AI +SL VSLTLTPM+C
Sbjct: 427  GSREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLAVSLTLTPMMC 486

Query: 487  ARWLKPQQAEQTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGINIALYVV 546
               LK  +  Q   +R    L   +   Y  SL W L+H RLT L LL TI +++ LY+ 
Sbjct: 487  GWLLKSGKPHQPTRKRGFGRLLVAIQGGYGKSLKWVLKHSRLTGLVLLGTIALSVWLYIS 546

Query: 547  VPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSVAGFIGGNSGTN 606
            +PKT  P+QDTG LMG I+ D  +SF  M+ K+E + + +  DPAV +V GF GG S  N
Sbjct: 547  IPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLEDFMKIIREDPAVDNVTGFTGG-SRVN 605

Query: 607  NAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGGGGRDQTSSQYL 666
            +  + + LKP  ER   AQ++I+RLRK+L K PG  LFLMA QD+++GG    Q ++ Y 
Sbjct: 606  SGMMFITLKPRDERHETAQQIIDRLRKKLAKEPGANLFLMAVQDIRVGG---RQANASYQ 662

Query: 667  YTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDRDQAKRLGIDMDM 726
            YTL S DLAALREW PK+   L ALPEL  +++       ++ L+ DRD   RLGI +  
Sbjct: 663  YTLLSDDLAALREWEPKIRKTLAALPELADVNSDSQNNGAEMDLIYDRDTMSRLGISVQD 722

Query: 727  VTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQVITADGARVPLSTIA 786
               +LNNA+ QRQISTIY  LNQY+VV++++P Y  D S L+++ VI ++   +PL+  A
Sbjct: 723  ANNLLNNAFGQRQISTIYQPLNQYKVVMQVDPVYTQDVSALDKMFVINSEDKPIPLAYFA 782

Query: 787  HYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLPEEVIAKLGGTA 846
             ++ + A   V+H+G  A+  I+F++  G S  +A  A+ RA+ ++G+P  V     GTA
Sbjct: 783  KWQPANAPLSVNHQGLSAASTISFNLPTGKSLSEASDAINRAMTQIGVPSSVRGSFAGTA 842

Query: 847  DAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVGALLALYVTGGEF 906
              F +T   Q  +IL A+  VY+VLGILYESY+HPLTILST+PSAGVGALLAL +    F
Sbjct: 843  QVFQETMNSQVILILAAIATVYIVLGILYESYVHPLTILSTIPSAGVGALLALELFDAPF 902

Query: 907  SLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLRLRPILMTTLAAI 966
            SLI+L+G+ LLIG+VKKNAI+M+D AL+ +R+    PEE+I +ACLLR RPI+MTTLAA+
Sbjct: 903  SLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGNLPPEEAIFQACLLRFRPIMMTTLAAL 962

Query: 967  LGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDRLRHRFNR 1021
             GALPL+LS   G+E+RQPLG+TI+GGLV SQ+LTLYTTPVVYL+ DRLR RF+R
Sbjct: 963  FGALPLVLSGGNGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSR 1017