Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 474 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  214 bits (546), Expect = 4e-60
 Identities = 139/461 (30%), Positives = 231/461 (50%), Gaps = 14/461 (3%)

Query: 31  ALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNALVEEL 90
           A L  C+L P+Y RP+    A  +   E + Q +   +     W E + D  L  L+E  
Sbjct: 12  AALGGCSLIPEYQRPDA-PVAGDWPQGEAYPQGAAQASERALGWREFFRDPALQQLIEVA 70

Query: 91  NRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSSLSN-NSSG- 148
             +N+ +  +       +AL R  RA + P++        SA G+G+ S +  + N +G 
Sbjct: 71  LENNRDLRVAALNVDAYRALYRVQRADVLPAV--------SADGSGTRSRTPGDMNMTGE 122

Query: 149 --IRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNYLQLR 206
             I + Y+A  GVSWE+DL+G+LR   +       AS A   S ++S  + +   +L L+
Sbjct: 123 PAISSQYSATFGVSWELDLFGRLRSLRDQALEEYFASEAAQRSTQISLIASVANAWLTLQ 182

Query: 207 VIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIWQRAQ 266
                 ++   T+  YE SL + +  +  GVA    + QAR+ + S +  +       AQ
Sbjct: 183 ADQALLQVTRDTLKTYEESLGLTQRSFDVGVASALELRQARSAVDSARVSIEQYTRLVAQ 242

Query: 267 FENAIAVLLGKA-PADFALADSKAIPALPQIPVSLPSQLLERRPDIAAAERNVMAANANI 325
             NA+ +LLG++ PA     D      L  +P+ LPS LL++RPDI  AE  + A NA+I
Sbjct: 243 DRNALTLLLGQSLPAGLPSGDGLERTQLAALPIGLPSDLLQQRPDILQAEYQLRAVNASI 302

Query: 326 GVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKRSAEVDRTVA 385
           G +RAA+FP +SL+ + G +SS  S   +  + YWS  P +++ +F+AG+  A +D    
Sbjct: 303 GAARAAFFPRISLTGAAGTASSELSGLFDGGSGYWSFSPSISVPIFNAGQLRANLDYAQI 362

Query: 386 VYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLTENQYRAGLI 445
             +  VAQY + +   FREV + L     Y  +   +++ L  + +   L E +YR G+ 
Sbjct: 363 SKNIQVAQYEKAIQTAFREVADGLAAQATYTRQVQAQRDLLQTSEDYYNLAERRYRTGVD 422

Query: 446 GYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGW 486
            YL V++ Q    + ++ ++     ++ + V L  ALGGGW
Sbjct: 423 SYLTVLDAQRQLFNVQQQLIGDRLAQMTSEVNLFKALGGGW 463