Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 521 a.a., efflux transporter, outer membrane factor lipoprotein, NodT family from Dechlorosoma suillum PS

 Score =  288 bits (736), Expect = 4e-82
 Identities = 171/466 (36%), Positives = 272/466 (58%), Gaps = 9/466 (1%)

Query: 28  LCVALLSACTLSPDYHRPELNSTAAQFKHA--EG-WTQASPSDAIARGAWWEIYGDAGLN 84
           L +  L+ C ++P Y RP + + +A FK A  EG W  A P++A  RG WW+++ D  L+
Sbjct: 17  LLLLALAGCAVTPPYQRPAVETPSA-FKEAPAEGQWKTAEPAEARPRGEWWKVFADPVLD 75

Query: 85  ALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSSLSN 144
            L  +   +NQ +    A+  QA+AL +++R+ALFP + +     R      S       
Sbjct: 76  TLEAQAAVANQDLKAGLARLAQARALQQNARSALFPQVGVGFGPTRQRPSPASQGLPAEA 135

Query: 145 NSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNYLQ 204
            +S     + AQ  VS+E DL+G++   + A  A A    A   S++L+ Q+++ Q Y  
Sbjct: 136 ETSPA-TLWRAQASVSYEADLFGRVSSGVAAAGADAAQRQALFHSLQLAIQADVAQAYFS 194

Query: 205 LRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIWQR 264
           LR +D    L   TVA  +++L++ + ++ AG  G   +A+ART+L   +A+ + +  QR
Sbjct: 195 LRELDALAALYADTVALRQQTLQLFQRRFDAGDVGELELARARTELAGAEAEAVGVERQR 254

Query: 265 AQFENAIAVLLGKAPADFALADSKAIPALPQIPVSLPSQLLERRPDIAAAERNVMAANAN 324
           A  E+A+AVLLG+APA F+L  +       ++P  LPS LLERRPDIAAAE+ ++AANA 
Sbjct: 255 AVAEHALAVLLGQAPAAFSLPPAPLGRITVRVPAGLPSALLERRPDIAAAEQAMVAANAR 314

Query: 325 IGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGP----QLALTLFDAGKRSAEV 380
           IG +RAA+FP LSL+ + GY SS   +  +  +R + +GP     L+L +FD G R A V
Sbjct: 315 IGSARAAFFPRLSLTGALGYESSELGDLFKWSSRAFVLGPLVGTMLSLPIFDGGARQAGV 374

Query: 381 DRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLTENQY 440
           D+  AV+D+  A+YRQ+VL  F+EVE+ L  L++   ++  + +A+ +A  + RL++ QY
Sbjct: 375 DQATAVFDEEAAKYRQSVLQAFKEVEDNLAHLRLLDRQSASQDQAVQSAARAARLSQLQY 434

Query: 441 RAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGW 486
           R G + YL V++   + L   R+ + L   R  A+V L+ A+GG W
Sbjct: 435 REGALSYLGVLDADRSVLQQRRAAVQLDGDRARATVALIRAIGGSW 480