Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 504 a.a., RND efflux system, outer membrane protein, NodT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  216 bits (551), Expect = 1e-60
 Identities = 149/483 (30%), Positives = 238/483 (49%), Gaps = 24/483 (4%)

Query: 15  LTRGRGSRLLGAGLCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDA--IARG 72
           + R   + LLGA    ALLS C + PDY RP ++  +A       W +A  +DA  +A  
Sbjct: 1   MIRRMTAMLLGA----ALLSGCAIGPDYQRPGMDLPSA-------W-RAESADAGMVAGE 48

Query: 73  AWWEIYGDAGLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSA 132
            WW ++GDA L+AL EE   +N  +A + A    ++A +  + + L PS+   T +  S 
Sbjct: 49  KWWTLFGDATLDALEEEALAANGDLATAMANVDASRAQLTVATSYLLPSI---TGQGSSV 105

Query: 133 QGTGSS-SSSLSNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIR 191
           +  GS    +       + + + A    S+E+DLWGK R    A  A    + A  A++R
Sbjct: 106 RQRGSERGQNPPVEGREVTDLHKASALASFELDLWGKYRRAHEAARAGLLGTEAAYATVR 165

Query: 192 LSQQSELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLK 251
           L+  S++ Q+Y  LR  D Q  +   T+ + E SL++ E ++ +G+       QA+ +  
Sbjct: 166 LAVVSQVAQSYFGLRAADRQLDIARQTLTSREESLKIREARFNSGLTSELDYRQAQAETA 225

Query: 252 STQADLIDLIWQRAQFENAIAVLLGKAPADFALA------DSKAIPALPQIPVSLPSQLL 305
           S +A +  L    A  E A++ LLG++P D          D +     PQIP  LP+ LL
Sbjct: 226 SARASVRQLEQAVAAAETALSSLLGRSPRDIVERSPERGLDIETFAVPPQIPAGLPAGLL 285

Query: 306 ERRPDIAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQ 365
            RRPD+A AE ++  A A+IGV++A   P +SL+   GY S   +  +   +  WS G  
Sbjct: 286 ARRPDVARAEADLHYATASIGVAKADLLPAISLTGLMGYESIDLTRLVSSSSGTWSYGAS 345

Query: 366 LALTLFDAGKRSAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEA 425
             + L D G+  A +D   A     +A Y Q V D FRE ++ LV  +        +   
Sbjct: 346 ATMPLLDFGRTLANIDMADAKQRAALAAYEQAVRDAFRETQDALVANRKTRQVVDAQATQ 405

Query: 426 LDAARESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGG 485
           + A   SL L   +Y  G   YL+V++ + +    + +++   + +L A VQ+  +LGGG
Sbjct: 406 VAALERSLTLARLRYENGYSSYLEVLDAERSLFQAQLNLVEARRNQLDAVVQVCKSLGGG 465

Query: 486 WDA 488
           W A
Sbjct: 466 WKA 468