Pairwise Alignments

Query, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

Subject, 498 a.a., RND transporter from Burkholderia phytofirmans PsJN

 Score =  277 bits (709), Expect = 5e-79
 Identities = 169/482 (35%), Positives = 258/482 (53%), Gaps = 18/482 (3%)

Query: 15  LTRGRGSRLLGAGLCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAW 74
           + R    R L      ALL+ACT+ P+Y RP+       ++    W  A PS A     W
Sbjct: 1   MKRVAACRALTTLASAALLAACTVGPNYERPQAE-VPPTWQTDSYWRVAVPSHAPISPDW 59

Query: 75  WEIYGDAGLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLST-------S 127
           W  + D  L  L  +    NQT+  + A Y QA+A + + RA   P +DL+        S
Sbjct: 60  WNAFSDPTLATLETQALAQNQTLVAASAHYEQARATLANDRAQQIPEVDLAAQGSRFRIS 119

Query: 128 KNRSAQGTGSSSSSLSNNSSGIRNTYNAQLG--VSWEIDLWGKLRETLNANEASAEASFA 185
           +NR     G+ ++S   N        N QLG  +S++ DL+G++R  +    ASA+ S  
Sbjct: 120 QNRPRTNYGTPTTSTVQN--------NVQLGPTISYDTDLFGRIRREVEGAAASAQQSAD 171

Query: 186 DLASIRLSQQSELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQ 245
           DLA+ RL   ++L  +Y  LR +D +  +L  +V   +++L     ++  G      V Q
Sbjct: 172 DLANARLVLTTDLASDYFSLRELDAEIDVLNQSVKLQQKALDYVTTEHDLGSVSGLDVLQ 231

Query: 246 ARTQLKSTQADLIDLIWQRAQFENAIAVLLGKAPADFALADSKAIPALPQIPVSLPSQLL 305
            ++ L ST+     L+ QRAQFE+AIA L+G     F++        +P I + +PS +L
Sbjct: 232 QKSLLDSTRVQAQLLLNQRAQFEHAIAALVGVPAPQFSIEPKVLAVQVPAIALGVPSDVL 291

Query: 306 ERRPDIAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQ 365
           +RRPD+A+AER + AANA IGV++AA+FP L+L+ S G+ S+ F++ +  P   W++G  
Sbjct: 292 QRRPDVASAERAMAAANAQIGVAKAAFFPSLTLAPSIGWESTQFASLLSAPTLMWTLGAA 351

Query: 366 LALTLFDAGKRSAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEA 425
           +   LFD G+R+A V      Y  T A YRQTVL  F++V++ +  L V    A    EA
Sbjct: 352 VGQVLFDGGRRAANVKFASEGYKATEANYRQTVLTAFQQVQDGITGLSVLDGAAKQSSEA 411

Query: 426 LDAARESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGG 485
           +  AR  L L  ++Y  GL+ YLDV+  Q + L++ER  + +   ++  SV LV ALGGG
Sbjct: 412 VTDARHLLALANDRYSGGLVAYLDVITAQQSLLTSERQDVQIHGQQMTLSVSLVKALGGG 471

Query: 486 WD 487
           WD
Sbjct: 472 WD 473