Pairwise Alignments

Query, 695 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 642 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  380 bits (977), Expect = e-110
 Identities = 204/430 (47%), Positives = 284/430 (66%), Gaps = 2/430 (0%)

Query: 251 SLTLANQELTQLALHDTLTDLPNRTLLADRIEQAIAKVAEQGGCFALMFIDLDGFKPVND 310
           +L  + +EL QLA +D L +LPNR L  +R +Q + +        AL+ IDLD FK +N+
Sbjct: 193 ALKRSREELDQLAHYDPLVNLPNRLLFTERAKQDLERARAHKRSGALLLIDLDHFKDINE 252

Query: 311 AFGHHIGDLLLKAVAARLRGHLHSQDTLARIGGDEFVLLVELQEPNDAMDVAVKQVNLVS 370
           + GH +GD LL+AV+ RL  HL    TL R+GGDEF LL E      A  +A++ ++ ++
Sbjct: 253 SLGHSLGDALLQAVSTRLSEHLEKGMTLGRLGGDEFALLCEGYGAEKATALALRILDRLN 312

Query: 371 RPFRVAEHDLQLSASLGIVLYP--GNGQDQHELLRNADAAMYHAKSAGKNGYSFFDVSMN 428
             F + + +L  SAS+GIVLYP   + Q+  +L+RNAD+A++ AKS+G++ Y+F+   + 
Sbjct: 313 ESFHIGDQELFSSASIGIVLYPYPTDVQNAEQLMRNADSALFKAKSSGRSTYAFYSEELT 372

Query: 429 SNARQQLQLLQDLRLALEQRQFRLHYQPKFDAQACQPIGAEALLRWEHPQQGLLLPDRFI 488
           S ARQ+++L+  LR ALEQ Q RLHYQP +D +     G EAL+RW+HP++GL+ P  FI
Sbjct: 373 SQARQRVELVTALRQALEQGQLRLHYQPIYDLRQGTISGFEALVRWQHPEKGLIAPGVFI 432

Query: 489 GLAEKTGLIIPIGEWVLTEACRQMRQWLDQGHHGWRMAVNLSAIQFCHAGLVDSVARALQ 548
            +AE+TGLI  I  WVL +AC Q R+WL QGH    +AVN+S+  F +  L   VA  L 
Sbjct: 433 PIAEETGLISAIDHWVLEQACNQAREWLGQGHPLGFIAVNISSRLFGNGELDLQVATILA 492

Query: 549 QNGLPANCLTLEITETTAMHDADASLTVLQRLSDMGVDLSIDDFGTGYSSLMYLKRLPAN 608
           ++GL A  L LEITE+  M D DA+L +LQRL  +GV L+IDDFGTGYSSL  LKR+  +
Sbjct: 493 RSGLEARHLELEITESAVMQDPDAALELLQRLRALGVQLAIDDFGTGYSSLQRLKRMNVH 552

Query: 609 ELKIDRGFVRDLEQDSDDAAIVSAIVALGQALGLRIVAEGVETDKQQDFLTRLGCDSLQG 668
           +LKID+GFVR L  D DDAAI  +++ L   LGL++VAEG+ET +Q  FL    CD  QG
Sbjct: 553 KLKIDQGFVRGLPDDRDDAAITRSVIGLAHNLGLKVVAEGIETAEQAAFLLAQNCDYGQG 612

Query: 669 YLLGQPVPAE 678
           Y   +P PA+
Sbjct: 613 YGFARPQPAD 622