Pairwise Alignments

Query, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

Subject, 166 a.a., Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

 Score = 76.6 bits (187), Expect = 2e-19
 Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 3/157 (1%)

Query: 7   PPEPGLPALYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLL 66
           P  P  P  +  +   +  W RR + N   A DL+ DTF+R+L S    + + +PRAYL 
Sbjct: 3   PKLPRSPGFFEHYEELIGTWTRR-LRNRQQAEDLAHDTFVRVLESDS--SGVEQPRAYLH 59

Query: 67  TVGKRLLSNFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDGLKPAIR 126
              + +  + ++R     A  +A     +     PE     ++   +++  L  L    R
Sbjct: 60  QTARNIAVDGYRREDRRGAMEEAAVDHSQSLSGDPEHYMHAIQLADSIERALAELPANCR 119

Query: 127 KAFLWSQLEGLGYAEIGQRLGVCQRSVKRYMAQAYEH 163
             F+W ++EGL  AEI +RLG+ +  V++YM +   H
Sbjct: 120 TVFVWQKIEGLTQAEIAERLGLSKNMVEKYMIRTLRH 156