Pairwise Alignments

Query, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

Subject, 139 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

 Score =  228 bits (581), Expect = 3e-65
 Identities = 111/138 (80%), Positives = 124/138 (89%)

Query: 31  MGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLTVGKRLLSNFHQRRSLEQAYLDAL 90
           MGNAWDAADL QDTFLR+L+S+Q LAD++EPRAYLLTVGKRLLSNF+ RRSLEQAYLDAL
Sbjct: 1   MGNAWDAADLRQDTFLRVLSSSQTLADLQEPRAYLLTVGKRLLSNFYTRRSLEQAYLDAL 60

Query: 91  AQLPEQHVPSPEQRWVLLETLQALDELLDGLKPAIRKAFLWSQLEGLGYAEIGQRLGVCQ 150
           A LPE   PSPEQRW+LLETLQALDELLDGL P +R+AFLWSQLEGLGY EI +RL V +
Sbjct: 61  ASLPEACAPSPEQRWLLLETLQALDELLDGLPPLVRRAFLWSQLEGLGYREIAERLHVSE 120

Query: 151 RSVKRYMAQAYEHCLLAE 168
           R+VKRYMAQAYEHCLL +
Sbjct: 121 RTVKRYMAQAYEHCLLVD 138