Pairwise Alignments

Query, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score =  146 bits (368), Expect = 2e-40
 Identities = 77/156 (49%), Positives = 102/156 (65%), Gaps = 2/156 (1%)

Query: 12  LPALYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLTVGKR 71
           L  LYR H GWL  WLRR++G +  AADL+QDTFLR+L      AD+ EPRA L  + K 
Sbjct: 9   LAHLYRAHHGWLHGWLRRQLGCSHQAADLAQDTFLRLLGRRS--ADLGEPRALLTHIAKG 66

Query: 72  LLSNFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDGLKPAIRKAFLW 131
           L+ +  +RR++EQAYL+ LA+LPE   PSPE R ++LE L  +D +L GL P  R+ FL 
Sbjct: 67  LVVDHWRRRAVEQAYLEVLARLPEAQAPSPETRLLVLEALCRVDAMLAGLPPRTREIFLL 126

Query: 132 SQLEGLGYAEIGQRLGVCQRSVKRYMAQAYEHCLLA 167
           SQL+GL Y  I +RLG    +VKR+M   +  C+ A
Sbjct: 127 SQLDGLTYGAIAERLGTSLITVKRHMRNGFIACMAA 162