Pairwise Alignments

Query, 391 a.a., putative Acetylornithine deacetylase from Pseudomonas putida KT2440

Subject, 384 a.a., succinyl-diaminopimelate desuccinylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 99/323 (30%), Positives = 138/323 (42%), Gaps = 31/323 (9%)

Query: 75  SGHTDVVPV-DGQAWTVEPFALSERDGRLYGRGTADMKGFIASVLAAVPAFLAQPLRMPV 133
           +GHTDVVP  D   W   PF  +  DG LYGRG ADMKG +A+++ A   F+A+    P 
Sbjct: 73  AGHTDVVPTGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMVVATERFVAKHPNHPG 132

Query: 134 HLAF--SYDEEVGCL-GVRSMLAALQQRPCKPRLCLIGEPT---ELKPVL--GHKGKLAM 185
            +AF  + DEE   + G   ++  L+ R  K    L+GEP+   +L  V+  G +G L  
Sbjct: 133 SIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTLKLGDVVKNGRRGSLTA 192

Query: 186 RCQVQGAACHSAYAPYGVNAIEYAAKLIGKLGEIGEALALPVHHD--ERFDPPFSTVQAG 243
              V+G   H AY     N I  AA  + +L +         H D    F PP S   A 
Sbjct: 193 NLTVKGVQGHVAYPHLADNPIHKAAPFLAELSQ--------THWDNGNAFFPPTSMQIAN 244

Query: 244 VIKGGRALNIVPDECEFDFEVRALPGFEAQAVADQLQTYAEAELLPRMRKVNTASAIRLA 303
           +  G  A N++P   E  F  R      A+ + ++++T   A  L      +        
Sbjct: 245 INGGTGASNVIPGALEVMFNFRYSTEVTAEILIERVETLLTAHEL----DYDIRWTFNGL 300

Query: 304 PLSAYPGLATPEDSEAARLVALLSGSDTFGTVAFGTEGGLF-DQAGIPTVVCGPGSMDQG 362
           P     G        A R V   +G DT      GT  G F    G   +  GP +    
Sbjct: 301 PFLTGEGPLLDATRHAIRQV---TGYDTDPQTTGGTSDGRFIAPTGAKVLELGPVNATI- 356

Query: 363 HKPDEFVSV---EQLRGCDAMLL 382
           HK +E V V   EQL  C  ++L
Sbjct: 357 HKVNECVKVDDLEQLALCYEVIL 379