Pairwise Alignments

Query, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 516 a.a., carbohydrate-selective porin from Dechlorosoma suillum PS

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 65/266 (24%), Positives = 106/266 (39%), Gaps = 33/266 (12%)

Query: 168 FMNAGFCGHPLNMSGGSGWTNYPNAHLGVRVKY----DLSPAWQLRVAAFNVDPESNGNS 223
           F+N  F  +PL  +GG    +      G RV Y         W+  +  F     +NG++
Sbjct: 273 FLNTVFVHNPLLDAGGDIGVDANGFSPGFRVSYYNETQKPETWRFSLGVFGAG--ANGST 330

Query: 224 SRAWHLGPKHTTGTVVPVELVYKLQGELPGEYKLGYYYDSSDVKRIGSDDEVSGRGGHYL 283
                  P      +  +E   K  G L G Y+  Y+ +   V   G  +  SG G   +
Sbjct: 331 YTRSFSSPM----VIAQMETQRKFFGGLTGNYRAYYWRNGQAVSFAGIQESHSGLG---V 383

Query: 284 LVDQAVWNDQASPGRSLHAFGQYSASSKAASPFTKWYGAGVVLYKPFEGRPKDTVALGYG 343
             DQ +       G ++  FG+Y         F K    G  L   +  R  D++ L +G
Sbjct: 384 SADQRI-------GDAVTVFGRYGQQISGNVRFDKALTLGAELGGSYWDRGGDSLGLAFG 436

Query: 344 RAVPNPRSRDVLEDAAF--NAGQQFPDID----SAEQLIELSYGYQATPWLNLRPDVQYI 397
                  S++   +++F    G   PD +     AE++ E+ Y Y+      L PD+QY+
Sbjct: 437 LL---RTSKEFSGESSFVDADGDGIPDYNFNASGAERVAEVYYRYRINKQFELSPDLQYL 493

Query: 398 IEPGAFSGKDIDNAL-VVGLQVKATF 422
             PG   G     A+ V+G++ + TF
Sbjct: 494 GRPG---GDATAKAIKVLGMRAQLTF 516