Pairwise Alignments

Query, 805 a.a., quinate dehydrogenase (quinone) from Pseudomonas putida KT2440

Subject, 600 a.a., Pyrrolo-quinoline quinone (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 97.8 bits (242), Expect = 2e-24
 Identities = 106/422 (25%), Positives = 173/422 (40%), Gaps = 87/422 (20%)

Query: 167 EQKDWAHYGNTEGGSRFAALDQINRDNVNKLKVAWTYQTGDVAISDGNGAEDQLTPLQIG 226
           + K WA         R++ LD+IN +NV  L+VAWT+ TG +   +G+       PL IG
Sbjct: 31  DSKQWAIQTGDYKNHRYSELDEINAENVGDLQVAWTFSTGVLRGHEGS-------PLVIG 83

Query: 227 SKVFICTPHNNLI-ALD-ADTGKELWKNEINAQSKVWQRCRGMAYFDATAAIAQPTQPNS 284
             +++ TP  N++ ALD ++ GK +WK E      V                  P     
Sbjct: 84  DTMYVHTPFPNIVYALDLSNEGKIIWKYEPKQDPDVI-----------------PVMCCD 126

Query: 285 SPITGVSVAAGANCQRRLLTNTIDGRLIAVDADTGEFCQGFGNNGQVDLKAGLGDVPDSY 344
           +   GV+ A G     ++  +  D +++A+DA+TG+      N          GD     
Sbjct: 127 TVNRGVAYADG-----KIFLHQADTKVVALDANTGDVLWEVQN----------GD----- 166

Query: 345 YQLSSAPLMAGTTVVVGGRVADNVQTDMPGGV--IRG----FDVITGEMRWA-------- 390
                 P +  T       V D V   + GG   +RG    +D+ +GE+ W         
Sbjct: 167 ------PSIGETNTATVLPVKDKVIVGISGGEFGVRGHVTAYDINSGELVWRAYSLGPDD 220

Query: 391 ---FDPGNPEDRQAPQGDKTYVRSTPN---------SWAPMSYDPAMNTVFLPMGSSSTD 438
               DP N      P G+ + + S            +W   + D   N  +   G+ ST 
Sbjct: 221 DMLVDPENTTHLGKPIGENSSLNSWEGDQWMIGGGTTWGWYAADMEENLFYYGTGNPST- 279

Query: 439 IYGVERSKLDHTYGASVLALDATTGNQKWVFQTVHNDLWDFDLPMQPSLIDFTKDDGQSV 498
            +   +   D+ +  +V+A D  TG  KW +Q   +D WD+D  +  +++   + DG+  
Sbjct: 280 -WNPAQRPGDNRWTMTVMARDIDTGMAKWFYQMTPHDEWDYD-GVNENILTEQEFDGEMR 337

Query: 499 PAVVIGTKAGQIYVLDRATGKPLT--QVDEVPVKPSNIPNEPYSPTQPKSVGMPQIGAQT 556
             +    + G  Y +DR TG+ L   + D V    + +  +P S T     G PQ+ AQ 
Sbjct: 338 KLLTRFDRNGLAYTMDRVTGELLVAEKFDPVVNWTTGVDMDPNSET----YGRPQVVAQY 393

Query: 557 LT 558
            T
Sbjct: 394 ST 395



 Score = 40.8 bits (94), Expect = 2e-07
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)

Query: 726 GTLSTQGGLVFIAGTQDFYLRAYDSSNGNEIWKARLPVGSQGGPMTYVSPKTGKQYVVIT 785
           G L+T G +VF  GT + +L+A  +  G E+++ + P G  G  MTY     G+QYV + 
Sbjct: 496 GALATAGDVVFY-GTLEGHLKAVHADTGEELYRFKTPSGIIGNVMTY--EHDGRQYVGVL 552

Query: 786 AG 787
           +G
Sbjct: 553 SG 554



 Score = 27.3 bits (59), Expect = 0.003
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 18/80 (22%)

Query: 684 LTAIDMKTRQVAWQVPVGTVEDTGPLGIRMHLPIK----IGLPTLGGTLSTQGGLVFIAG 739
           + A+D  T  V W+V  G     G       LP+K    +G+   GG    +G       
Sbjct: 148 VVALDANTGDVLWEVQNGD-PSIGETNTATVLPVKDKVIVGIS--GGEFGVRG------- 197

Query: 740 TQDFYLRAYDSSNGNEIWKA 759
               ++ AYD ++G  +W+A
Sbjct: 198 ----HVTAYDINSGELVWRA 213



 Score = 25.8 bits (55), Expect = 0.007
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 14/73 (19%)

Query: 179 GGSRFAALDQINRDNVNKLKVAWTYQTGDVAISDGNGAEDQLTPLQIGSKVFICTPHNNL 238
           G   F A D IN + +  +   ++  +G +A +              G  VF  T   +L
Sbjct: 469 GMGNFIAWDNINGEILWSIPEKFSVWSGALATA--------------GDVVFYGTLEGHL 514

Query: 239 IALDADTGKELWK 251
            A+ ADTG+EL++
Sbjct: 515 KAVHADTGEELYR 527