Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  156 bits (395), Expect = 5e-43
 Identities = 100/297 (33%), Positives = 161/297 (54%), Gaps = 6/297 (2%)

Query: 1   MDKLLAMKMFVATVDAQGFSAAARRLGLATSSVTRLVDALEASLGATLLNRSTRQVSLTE 60
           MDK   M +F + V  QG +AA R L L+ ++VT  + ALE   G  LLNRSTR +SLTE
Sbjct: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60

Query: 61  AGARYYQRARGIFEALDEADASIADRGEEPVGVLRLSLPVEFGRRVIAPHLGPFLAQHPA 120
           +G  Y+Q    I  ++ E +  +    +E  G L++S P + G++ IAP L  F  Q+P 
Sbjct: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120

Query: 121 LELDIDLSDRLDDLLDGRYDLSIRLGDPSPNDELVCRRLGGFQRWLVASPAYLAGREPLQ 180
           +   + L+D + +L +   D+ IR G+ + +  L+ R+L   +R L ASPAYLA +   +
Sbjct: 121 VVPYLYLNDNISNLAESGLDVVIRYGELA-DSSLISRKLATSRRVLCASPAYLARKGIPK 179

Query: 181 HPQELLDHACLRF-RYGQKARPWRLTCGQDSLELDVSGPLRSANADMLRETALAGSGIAL 239
            PQ+L  H CL   R  ++ + W     +    + V     + + +++R+ ALAG GIAL
Sbjct: 180 TPQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIAL 239

Query: 240 LADWLVREDVLAGRLQRI----FPDWQASPGAANSSINALYMPNHRGSRRVNAFIDF 292
            +   V++D+   RL  +      ++ AS  A+ + +N LY+      +R+  FIDF
Sbjct: 240 KSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDF 296