Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  160 bits (405), Expect = 4e-44
 Identities = 102/297 (34%), Positives = 160/297 (53%), Gaps = 7/297 (2%)

Query: 1   MDKLLAMKMFVATVDAQGFSAAARRLGLATSSVTRLVDALEASLGATLLNRSTRQVSLTE 60
           ++ L  + +F     A  FSAAAR+LG++ S V+  V  LE  LG  L+ R+TR +SLTE
Sbjct: 2   LELLEPIAIFTHVARAGSFSAAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTE 61

Query: 61  AGARYYQRARGIFEALDEADASIADRGEEPVGVLRLSLPVEFGRRVIAPHLGPFLAQHPA 120
           AG   Y +   +    D+A AS+ +  +   GVL++ +   FG   I P L  F+A+HP 
Sbjct: 62  AGHLLYVQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPEFMARHPE 121

Query: 121 LELDIDLSDRLDDLLDGRYDLSIRLGDPSPNDELVCRRLGGFQRWLVASPAYLAGREPLQ 180
           LEL + L D   D++    DL + + +  P   +V R L   Q  LVASP Y+A      
Sbjct: 122 LELQVSLLDHKVDVVSEGLDLLLTMSEQLPLG-MVARPLMKCQFLLVASPEYIARHGEPS 180

Query: 181 HPQELLDHACLRFRYGQ--KARPWRLTCGQDSLELDVSGPLRSANADMLRETALAGSGIA 238
            P++L+DH CL + +G+  +   W+   G D  E+ VSG  R  NA  L+  A++G G+ 
Sbjct: 181 RPEQLVDHNCLVY-HGEWHEHSVWQFKRGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVV 239

Query: 239 LLADWLVREDVLAGRLQRIFPDWQASPGAANSSINALYMPNHRGSRRVNAFIDFCEN 295
            LA +L+ +++  G L  +  DWQ +    +  + A+Y      + +V++FIDF +N
Sbjct: 240 YLASYLMEDEINKGTLVPLLRDWQLT---HHLPLQAVYPRRKHLAPKVSSFIDFIKN 293