Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  165 bits (417), Expect = 1e-45
 Identities = 96/292 (32%), Positives = 154/292 (52%), Gaps = 5/292 (1%)

Query: 1   MDKLLAMKMFVATVDAQGFSAAARRLGLATSSVTRLVDALEASLGATLLNRSTRQVSLTE 60
           M+   A+ +FV  V+   FS A ++LGL+ S++++ +  LE  LG  LL R+TR +SLT+
Sbjct: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60

Query: 61  AGARYYQRARGIFEALDEADASIADRGEEPVGVLRLSLPVEFGRRVIAPHLGPFLAQHPA 120
           AGARY++  R   +   E   +I++  + P G LR+S+P+ FGR  IAP +  FL ++P 
Sbjct: 61  AGARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120

Query: 121 LELDIDLSDRLDDLLDGRYDLSIRLGDPSPNDELVCRRLGGFQRWLVASPAYLAGREPLQ 180
           ++L + + D++ DL+ G +DL+IR+G+  P+  L+ R++      + ASPAYL       
Sbjct: 121 IQLQMQMDDKITDLIAGGFDLAIRIGE-LPDSSLIARKIAPCLSVICASPAYLTQHGLPM 179

Query: 181 HPQELLDHACLRFRYGQKARPWRLTCGQDSLELDVSGPLRSANADMLRETALAGSGIALL 240
            P EL  H CL + Y Q    W          +   G  +  N+D + +  L G GIA L
Sbjct: 180 TPCELTQHNCLFYSYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANL 239

Query: 241 ADWLVREDVLAGRLQRIFPDWQASPGAANSSINALYMPNHRGSRRVNAFIDF 292
             ++V  D+  G LQ +  D+          I A+Y        +V   I+F
Sbjct: 240 PRFIVEPDLQTGHLQALLTDYP----LPEHGIYAVYPQRKYQPTKVTVLIEF 287