Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 347 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 83/311 (26%), Positives = 147/311 (47%), Gaps = 13/311 (4%)

Query: 5   IRLLIMPLPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQV 64
           IR+  + + +F+++ F   +D L         S       +  G+S   V S  G V+  
Sbjct: 29  IRVAFVLMDNFSMMSFTGAVDAL---VTANLMSDMPLYEVLTVGVSGGQVTSDLGIVIST 85

Query: 65  EAIADQLDLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLLAAC 124
           +    Q+  +  D L+V GG          P  +  LR  A +G  L G+ NG F +A  
Sbjct: 86  DIELAQMPENQ-DVLIVAGGFRVKLQGH--PLLRRKLRANAASGTILGGLWNGVFFVADA 142

Query: 125 GLLQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSRAC 184
            LL G +  VH    A     FP +++   + Y +D  R++CAG  +++ + + L+ +  
Sbjct: 143 NLLDGFECAVHPESRAMMAEVFPHVKV-SSRAYVVDRERVSCAGANSSLRMMLQLIRQTG 201

Query: 185 GRTRALKGLADMLV--DETRDSRHALRSL--ELGACQGRQVQRAQALMRHHLGTPLAVEQ 240
           G   AL G  + ++  DE+ D    L  +  E        ++ A  LM  ++  PL +++
Sbjct: 202 GA--ALVGAIEEILRCDESGDDATDLPPVFVETDPTLPESLKLALELMWQNVEEPLTIDE 259

Query: 241 LAAELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDAS 300
           LAA + IS+RQL+R+F +  G +   ++LE+RL +AR  +  ++ S+ +IA   G   + 
Sbjct: 260 LAACVKISKRQLERRFCSFLGATPTRYYLELRLTRARQLIQQTNRSVTEIAVATGFVSSP 319

Query: 301 YLGKCVRRRFG 311
           +  +  R  FG
Sbjct: 320 HFQRRFRDFFG 330