Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 334 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  135 bits (340), Expect = 1e-36
 Identities = 99/326 (30%), Positives = 156/326 (47%), Gaps = 25/326 (7%)

Query: 7   LLIMPLPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQVEA 66
           L+   +P+F++LPF A ++ LR +     Y      +W +A    + V SS+G  L+V  
Sbjct: 11  LVFFLVPNFSMLPFSAAIETLRIANRMLGYEAY---TWRLASTDGQKVYSSAGIALEVNT 67

Query: 67  IADQLDLDLFDYLVVFGGRSAMATAALAP----------RYQALLRQAAKAGVKLVGVDN 116
                   L D     GG S  +   +               A LR+A   G+ +  +  
Sbjct: 68  -------SLADERKYLGGESRPSMVLVCSGVYVEDFQNKSVNAWLREAYNRGIAVGSLCT 120

Query: 117 GAFLLAACGLLQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLA 176
           GA +L + GLL G +  +HW +   F  +FPQ  +  + LY IDGN  TCAGGTA++D+ 
Sbjct: 121 GAHVLDSAGLLTGKRCAIHWENLPGFSESFPQADVYAD-LYEIDGNIYTCAGGTASLDMM 179

Query: 177 VALLSRACGRTRALKGLADMLVDETRDSRHALRSLELGACQGRQVQRAQA---LMRHHLG 233
           + L+ +  G     +     L D  R   H  + L L A  G Q  +  +   LM  +L 
Sbjct: 180 LNLIDQDFGENLVNRVCEQALTDRVRGP-HDRQRLPLRARLGVQNAKVLSIIELMESNLS 238

Query: 234 TPLAVEQLAAELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADE 293
            PL++ ++A    +SRRQ++R F+   G S   ++LE+RL +AR  L+ SS  + ++A  
Sbjct: 239 EPLSLLEIAESADLSRRQIERLFRQEMGRSPARYYLEIRLDRARHLLIQSSMPVVEVAVA 298

Query: 294 VGLGDASYLGKCVRRRFGCTALQLRA 319
            G   AS+  KC R  +  +  Q RA
Sbjct: 299 CGFVSASHFSKCYRELYNRSPQQERA 324