Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 335 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  109 bits (272), Expect = 1e-28
 Identities = 82/318 (25%), Positives = 149/318 (46%), Gaps = 12/318 (3%)

Query: 5   IRLLIMPLPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQV 64
           I ++++ LP+ +++ F + LD +R +     +   R   W +     + V  + G  + V
Sbjct: 13  IEVVVVVLPESSIMSFASVLDPMRAANRVAGHEVFR---WRLLSADGQAVMLTCGVPIAV 69

Query: 65  EAIADQLDLDLF-DYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLLAA 123
           +       L +  D L++ GG +    A    R+ A L++ A+    + GV++G +LL  
Sbjct: 70  DG---SFTLPVVGDLLLIIGGFNLHRHAG--KRFLATLQECARHFDIVAGVESGCWLLGR 124

Query: 124 CGLLQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSRA 183
            GL+ G K   HW    +F  AFP+L+++ ++ + IDG   T  G +   D+ + L++  
Sbjct: 125 SGLINGRKATAHWEELEDFSQAFPELEVIGDR-FVIDGKYWTSGGASPTFDMMLHLVAER 183

Query: 184 CGRTRALKGLADMLVDETRDSRHALRSLELGACQGRQVQRAQA--LMRHHLGTPLAVEQL 241
            G   AL   +  + D+          + LG  + R  + A A  LM   L  P+ V  L
Sbjct: 184 LGPALALDVASIFVYDQMHGPTDVQPFVSLGRIEARDPELAAAIRLMERTLERPMTVAAL 243

Query: 242 AAELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDASY 301
           A  L +S+R+L+  F      S  A++L +RLQ A   + ++   +  IA   G    S 
Sbjct: 244 ARRLSVSQRKLETLFAKGLSTSPGAYYLRLRLQVAHRLVRDTGIPMRDIALRCGFDSLSA 303

Query: 302 LGKCVRRRFGCTALQLRA 319
             +  RR +  +AL++R+
Sbjct: 304 FSRAYRREYRTSALKMRS 321