Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 318 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  110 bits (276), Expect = 3e-29
 Identities = 87/302 (28%), Positives = 143/302 (47%), Gaps = 13/302 (4%)

Query: 13  PDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAVLQVEAIADQLD 72
           P+F L+ F + ++ LR +      S +R  SW+      E + +S+G  + +E      +
Sbjct: 3   PNFPLMAFSSVIEPLRAA---NTLSGRRCYSWLTVAAG-EKISASNG--IGIEPDFHVRN 56

Query: 73  LDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLLAACGLLQGHKV 132
               D +VV  G  A     +A    A +R+  +AG +L  V + AF LA  GLL GH  
Sbjct: 57  APEVDRIVVCSGGDA--EHLVADEEMAWIRKNLRAGAQLGAVADAAFFLARKGLLDGHSC 114

Query: 133 VVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLSRACGRTRALKG 192
            +HW  +  F+ AFP L  +R  LY ID  R T  GG  ++D+ + ++ R  G   A  G
Sbjct: 115 TLHWTSQPAFKEAFPHLD-MRSDLYVIDRRRFTSVGGIGSLDMMLDMIGRDYGAELA-DG 172

Query: 193 LADMLVDETRDSRHALRSLELGACQG---RQVQRAQALMRHHLGTPLAVEQLAAELGISR 249
           +A   +          R L L    G     V  A A+M   +   L +E LA+ L +S 
Sbjct: 173 VAGWFMHSPLRPDADRRKLTLRIRSGIADDLVLSAVAMMEDAIEDVLRIEDLASRLNVSS 232

Query: 250 RQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLGDASYLGKCVRRR 309
            +L+R F+A  G+S  +++  +RL  A   L +S+  + ++A   G  +A+   +  + +
Sbjct: 233 DKLERAFKAELGVSPNSYYRNLRLGHAADMLTHSNLKVNEVAVACGFVNAANFSRAFKEQ 292

Query: 310 FG 311
           FG
Sbjct: 293 FG 294