Pairwise Alignments

Query, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 335 a.a., transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  105 bits (261), Expect = 2e-27
 Identities = 85/322 (26%), Positives = 144/322 (44%), Gaps = 15/322 (4%)

Query: 2   PLDIRLLIMPLPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGAV 61
           PL + +LI P   F +    + ++ LR  A +E   ++ +  W V   + +PV SS+G  
Sbjct: 7   PLTLGILIFP--GFPMACLTSCIEPLR--AANEIAGKEAF-RWTVVAETADPVASSAGVS 61

Query: 62  LQVEAIADQLDLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFLL 121
              + +    DL   D+L    G +A        R  A L++  +   +L     G F L
Sbjct: 62  FGPDTVL--ADLAEHDFLFFTAGPNAQFDQPA--RANAALQRITRRKTRLGAFSGGVFPL 117

Query: 122 AACGLLQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALLS 181
           A  GL+ GH + VHW +EA F A FP ++  +  + C  G+ +T +G TA  D  + L+ 
Sbjct: 118 ARTGLVAGHPLSVHWCYEAAFEAEFPDIER-QSTVICDQGSFVTISGATAVFDYMLTLIE 176

Query: 182 RACGRTRALKGLADMLVDETRDSRHALRSLELGACQGR-----QVQRAQALMRHHLGTPL 236
              G     +          R +  + ++      + +     +V +A      H+  P+
Sbjct: 177 EHLGGEIMAEVACWFQHPYVRSAATSQKTPAFSTAKSKDLLPKKVTQAIEHFAEHIEDPI 236

Query: 237 AVEQLAAELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGL 296
            +  +A  +G+S R L+R F+ + G S   ++  MR+ QAR  +L SS S+ +IA  VG 
Sbjct: 237 QISDVADAIGVSARSLERSFKEATGQSPLKYYRMMRMNQARQLVLYSSTSVTEIAYMVGY 296

Query: 297 GDASYLGKCVRRRFGCTALQLR 318
                  +  R  FG T +  R
Sbjct: 297 STPGAFLRIYRESFGVTPINDR 318