Pairwise Alignments

Query, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 332 a.a., periplasmic binding transmembrane protein from Sinorhizobium meliloti 1021

 Score =  164 bits (415), Expect = 3e-45
 Identities = 98/341 (28%), Positives = 164/341 (48%), Gaps = 21/341 (6%)

Query: 7   LLAGLLLTVGLASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGYGYRTDTLPG 66
           LLA   L  GL    SAASA +   +    + W+S  +   + + I+  GYG   + + G
Sbjct: 4   LLATTCLAAGLLGLGSAASAAECGDVTIANMNWQSAEVLASVDKFILTEGYGCSAELVVG 63

Query: 67  STV-SMEVALARNDLQVIAEEWAGRSPAWV-----KAEQAGQVFALGDTVKNAEEGWWVP 120
            TV ++   + + +  +  E W    P  V     + +  G   AL D    A +GWWVP
Sbjct: 64  DTVPTITSMIEKGEPDIAPEGWVDLLPDVVNRGLQEGKLVGAAVALSD---GAVQGWWVP 120

Query: 121 AYVIEGDAARNLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQKL 180
            Y+++ +         P++ +++D+ ++ ++F DPE P KG   N P GW    V +Q  
Sbjct: 121 KYIVDAN---------PDIKTIDDVLKHKELFPDPEDPSKGAIFNGPQGWGGTVVTTQLY 171

Query: 181 KAYGLDGL-YNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLEE-PPF 238
           KAYG +   +    +GS A +D  I  A  R +    YYW PT L+G+Y++++LE   P 
Sbjct: 172 KAYGAEAAGFTLVDTGSAAGLDGSIAKAYERKQGWAGYYWAPTALLGKYEMVKLEHGVPN 231

Query: 239 DAQAWATLTDPAN-PNPKGSRSLPAKLSIGVSKAFRENYPDLVSVFEQVDLPIDRLNKAL 297
           D   W      A+ P+PK +     K+   V+K F +     +          D +NK +
Sbjct: 232 DMAEWKRCNTVADCPDPKKNDWPKDKVQTLVTKEFADRAGPAMEYLNTRAWTNDTVNKLM 291

Query: 298 AVMSEKRTPPREAALTFLRDNREVWKAWLPADIAAKVEASL 338
           A M++ +    E A  FL +N ++W  W+  ++A K++A+L
Sbjct: 292 AWMTDNQASGEEGAKHFLEENPDLWTKWVSPEVAEKIKAAL 332