Pairwise Alignments

Query, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 344 a.a., histidine-binding periplasmic signal peptide protein from Sinorhizobium meliloti 1021

 Score =  291 bits (744), Expect = 2e-83
 Identities = 143/343 (41%), Positives = 211/343 (61%), Gaps = 8/343 (2%)

Query: 3   SISTL-----LAGLLLTVGLASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGY 57
           SIST+      AGL+L    AS  +A+       + F  I WESGA  TE+++ I+ +GY
Sbjct: 2   SISTMRLTFAAAGLMLAAS-ASGANASYCGDGKTVTFAGIDWESGAFITEVMKTILSKGY 60

Query: 58  GYRTDTLPGSTVSMEVALARNDLQVIAEEWAGRSPAWVKAEQAGQVFALGDTVKNAEEGW 117
             + D++PG++V++E A A ND+Q+ AEEW GRS  W KA +  +V A+G T   A EGW
Sbjct: 61  DCQVDSIPGNSVTLEQATANNDVQIFAEEWLGRSDVWNKAVEEKKVIAVGKTFVGASEGW 120

Query: 118 WVPAYVIEGDAARNLKPVAPELHSVEDLK--RYPQVFSDPESPGKGRFLNSPSGWTSETV 175
           +VP YV+ GD ARN++  AP+L SV  L   +  ++F+DPE P KGRFLN PSGWT E V
Sbjct: 121 FVPDYVVHGDPARNIEAKAPDLKSVSQLTDPKIAEIFADPEEPSKGRFLNCPSGWTCEGV 180

Query: 176 NSQKLKAYGLDGLYNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLEE 235
           ++ KL+AY L   Y NFR G+G A+DA I SA  +G+P+LFYYW+PT ++G++KLI+LEE
Sbjct: 181 STAKLEAYKLGETYVNFRPGTGTALDAAITSAYLQGEPILFYYWSPTAILGKFKLIQLEE 240

Query: 236 PPFDAQAWATLTDPANPNPKGSRSLPAKLSIGVSKAFRENYPDLVSVFEQVDLPIDRLNK 295
           P ++   W  L+       +G       ++ GV+  F    P++V + E+   P+D +N 
Sbjct: 241 PAYNEACWKELSSANGKRDEGCAFPSVDVAYGVNSTFASEAPEIVEILEKATFPLDEVNA 300

Query: 296 ALAVMSEKRTPPREAALTFLRDNREVWKAWLPADIAAKVEASL 338
           +LA M++ +     AA  FL+   ++W  W+  +   K+EA L
Sbjct: 301 SLAYMADNKVDATAAAAEFLKTKGDIWSKWVSDEARGKIEAGL 343