Pairwise Alignments

Query, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 289 a.a., glycine betaine ABC transporter substrate-binding protein from Parabacteroides merdae CL09T00C40

 Score = 50.4 bits (119), Expect = 5e-11
 Identities = 61/311 (19%), Positives = 122/311 (39%), Gaps = 43/311 (13%)

Query: 11  LLLTVGLASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGYGYRTDTLPGSTVS 70
           L++   +   D + S+     +  G + W  G   + + ++++E   GY           
Sbjct: 12  LIVAFMMMFADCSDSSNGRKQVSIGYVNWSEGIAMSYLAKVMLE-SKGYDVMLRNADIAP 70

Query: 71  MEVALARNDLQVIAEEWAGRSPAWVKAEQAGQVFALGDTVKNAEEGWWVPAYVIEGDAAR 130
           + V++A   + V  + W   + A    +    + ALG   KNA  G  VP+YV       
Sbjct: 71  VFVSMAAGKVDVFMDAWLPATHADYIRKYGDNLEALGVAYKNARMGLVVPSYV------- 123

Query: 131 NLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQKLKAYGLDGLYN 190
                   + S+E+L  + + F + E  G    ++  +G  +ET   + ++ Y ++    
Sbjct: 124 -------TIRSIEELNEHKEKFRN-EIIG----IDVGAGLMNET--ERVIREYPVE---L 166

Query: 191 NFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLEEPPFDAQAWATLTDPA 250
             +  SGA M A +  +I   + ++   W P  +  RY L  L++               
Sbjct: 167 TLKPSSGATMVAFLQKSIENKEWIVVTGWTPHWMFSRYDLKFLDD--------------- 211

Query: 251 NPNPKGSRSLPAKLSIGVSKAFRENYPDLVSVFEQVDLPIDRLNKALAVMSEKRTPPREA 310
              P+       ++ I  +K F +  P   + F    L  D+L++ + ++        E 
Sbjct: 212 ---PQKQYGDAEQIQIMATKGFSDKDPYAAAFFRNFSLDNDQLSELMDLVEAYPMHEEEG 268

Query: 311 ALTFLRDNREV 321
           A  +L ++ EV
Sbjct: 269 AKIWLSEHPEV 279