Pairwise Alignments

Query, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 323 a.a., glycine betaine-binding protein from Phaeobacter inhibens DSM 17395

 Score =  117 bits (293), Expect = 4e-31
 Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 22/341 (6%)

Query: 1   MKSISTLLAGLLLTVGLASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGYGYR 60
           M  IST   GL      A T SAA A+    +      W S  + T + + ++E GYG  
Sbjct: 1   MFKIST---GLGCVFAAAITASAAQADDCGEVSIMQGDWGSAQIVTAVAKFLMEEGYGCD 57

Query: 61  TDTLP-GSTVSMEVALARNDLQVIAEEWAGRSPAWVKAEQAGQVFALGDTVKNAE-EGWW 118
              +P  S  ++       +  ++ E W   +PA+     +G +  + + + +   EG++
Sbjct: 58  VTAMPLSSNPALASVSETGEPDILTEIWTNGAPAYQGLVDSGAIIPVTEVLSDGGVEGFF 117

Query: 119 VPAYVIEGDAARNLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQ 178
           VP Y++E           PEL ++E +   P++  +       RF N P GWT   V++ 
Sbjct: 118 VPNYLVEEH---------PELATIEGIAANPELVGN-------RFHNCPEGWTCLNVSTN 161

Query: 179 KLKAYGL-DGLYNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLEEPP 237
            +KA GL D    NF  GSG  + A I +A    +P   +YW PT ++G+Y +  ++  P
Sbjct: 162 LMKAGGLIDAGIENFVHGSGETLAASIAAAYENKEPWFGFYWAPTSVLGKYPMTLVDMGP 221

Query: 238 FDAQAWATLTDPANPNPKGSRSLPAKLSIGVSKAFRENYPDLVSVFEQVDLPIDRLNKAL 297
            D +  A         P  S    +++   +SK F     ++  +   +     ++ + L
Sbjct: 222 HDPEKHACNITAECDTPAMSAFPRSEVVTVLSKEFMAENAEISELMTNLSFTNAQMGETL 281

Query: 298 AVMSEKRTPPREAALTFLRDNREVWKAWLPADIAAKVEASL 338
           A + +      E A+ FL   ++VW AWL      K+ A L
Sbjct: 282 AWVEDNNASYDEGAVHFLTTYKDVWGAWLNDAARDKLSALL 322